| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2311 |
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| Symbol | rpsA |
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| ID | 6116582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2840316 |
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| End bp | 2841983 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633817 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001760685 |
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| Protein GI | 170726659 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000015623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000568585 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGAAT CTTTTGCTGA TCTATTTGAA CAATCCCTTA ATGAACTTGA GTTCCGTCCT
GGTTCTATCG TAACTGGTGT CGTTGTACGC ATCGAAAACG GTACTGTACT AGTTGACGCT
GGTCTTAAGT CAGAGAGCCC AATCCCAGCT GAGCAGTTCA AAAATGCTCA AGGCGAACTA
GAAATCGCTG TTGGTGATTC TGTTGACGTA GCGCTTGACT CTGTTGAAGA TGGCTTCGGT
GAGACTCAAC TGTCTCGCGA AAAAGCTAAG CGTCACGAAG CTTGGATCGT TCTAGAAAAA
GCGTACGAAG ATGCTGAAAC TGTAATCGGT GTCATCAATG GTAAGGTTAA AGGCGGTTTC
ACTGTTGAAT TAAACGGTAT CCGTGCATTC CTACCTGGTT CTCTAGTTGA CGTTCGCCCA
GTTCGCGATA CTGCTCACCT AGAAAACAAA GATCTAGAAT TCAAAGTTAT CAAGTTAGAC
CAGAAGCGCA ACAACGTTGT TGTTTCTCGT CGTGCTGTTA TCGAATCTGA AAGCAGTGCA
GAGCGTGATG CTCTTCTTGA GAACCTACAA GAAGGTCAAT CAGTTAAAGG TATCGTTAAG
AACCTTACTG ACTACGGTGC ATTCGTAGAC CTAGGTGGCG TTGACGGTCT TCTACATATC
ACAGATATGG CTTGGAAGCG CGTTAAGCAC CCATCTGAAA TCGTAAATGT TGGTGATGAA
ATCAACGTTA AAGTTCTTAA GTACGATCGT GAGCGCACTC GTGTTTCACT AGGTCTTAAG
CAACTTGGCG AAGATCCATG GTTAGAAATC AGCAAGCGTT ACCCAGAAAG CACTAAGCTT
ACTGGTCGCG TAACTAACCT AACTGACTAC GGTTGTTTCG TTGAAATCGA AGAAGGCGTT
GAAGGTCTTG TTCACGTTTC TGAAATGGAT TGGACTAACA AGAACATCCA CCCATCTAAG
GTTGTTAACC TAGGTGATGA AGTTGAAGTT CTAGTTCTTG ACATCGATGA AGAGCGTCGT
CGTATCTCTC TTGGTCTTAA GCAGTGTAAA GTTAACCCAT GGGATGACTT CGCAGATCGT
TTCGCTAAAG GCGACAAGGT TACTGGTAAG ATCAAGTCAA TCACTGACTT CGGTATCTTC
ATCGGTCTAG ACGGCGGCAT CGACGGTCTA GTTCACCTTT CTGACATCTC TTGGAACGGT
ACTGGCGAAG AAGCTGTTGC TGAATACAAG AAGGGCGACG AGATCAACGC AGTTGTTCTT
TCTGTTGACC CAGAGCGCGA GCGTATCAGC CTAGGCGTTA AGCAAACTGA AGACGATCCG
TTCAATGCTT ATCTTGCAGA TAAGAAGAAA GGTGCTATTG TAAATGGTAC AGTGACTGCA
GTAGACGCTA AAGGCGTTAC TATTGAACTA GCTGAAACTG TTGAAGGTTA CCTACGTGTA
TCTGATATCT CTCGCGAGCG TATCGAAGAT GCATCTACAG TTTACTCTGT AGGCGACGCT
GTTGAATCTA AGTTCATGGG TGTTGACCGT AAGAACCGTA CAATTAGCCT GTCTATCAAA
GCGAAAGACG AAGCTGATGA AAAAGAAGCT ATGGCTAGCT TGAACAAGCA AGAAGATGAC
GTAATGAGCT CAGCTATGGC TGAAGCATTC AAAGCGGCTC GTAAGTAA
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| Protein sequence | MTESFADLFE QSLNELEFRP GSIVTGVVVR IENGTVLVDA GLKSESPIPA EQFKNAQGEL
EIAVGDSVDV ALDSVEDGFG ETQLSREKAK RHEAWIVLEK AYEDAETVIG VINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTAHLENK DLEFKVIKLD QKRNNVVVSR RAVIESESSA
ERDALLENLQ EGQSVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
INVKVLKYDR ERTRVSLGLK QLGEDPWLEI SKRYPESTKL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNLGDEVEV LVLDIDEERR RISLGLKQCK VNPWDDFADR
FAKGDKVTGK IKSITDFGIF IGLDGGIDGL VHLSDISWNG TGEEAVAEYK KGDEINAVVL
SVDPERERIS LGVKQTEDDP FNAYLADKKK GAIVNGTVTA VDAKGVTIEL AETVEGYLRV
SDISRERIED ASTVYSVGDA VESKFMGVDR KNRTISLSIK AKDEADEKEA MASLNKQEDD
VMSSAMAEAF KAARK
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