Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2310 |
Symbol | cmk |
ID | 6116581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2839521 |
End bp | 2840213 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641633816 |
Product | cytidylate kinase |
Protein accession | YP_001760684 |
Protein GI | 170726658 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000698578 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000443143 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGAAC GGGCTCCTGT TGTCACTATT GACGGCCCTA GCGGTGCTGG GAAGGGTACT ATCAGCCAGC TACTAGCCGA GCGTTTAGGC TGGAAATTAT TAGACAGTGG TGCGATATAC CGTGTCTTAG CTTTAGCTGC AATTCATCAT AATGTAGAGC TGGACAATGA AGATTCTCTT ACCTTACTCG CCGCACACCT GGATGTGCAG TTTATTACGG GTAACGGTAG CAAAGGTATT AAGGTCGTAC TAGAAGGTGA AGATGTCTCT AATGATATCC GCAGCCAAGA GTGTTCAAAT GCTGCGTCAA AAGTCGCGGC ATTCCCGAGA GTAAGAGAAG CATTATTGCG TCGCCAACGT GCATTTAGTG AGGCACCAGG TTTGATTGCC GATGGTCGTG ATATGGGGAC CGTTGTATTC TCTAAAGCGC CAGTGAAACT TTATTTAACT GCATCGGCTG AAGAAAGGGC TCAAAGACGC TATAATCAGT TGCAGGACAA GGGCTTCGAT GTTAATATCG ATCAGCTTTT GACTGAGATA AAAGAGCGTG ATGACCGCGA TATGAACCGC AGCGTTGCTC CTTTGGTTCC TGCCGAGGAT GCATTGGTTA TCGATACCTC TCAAATCGGG ATAGAAGAAG TGCTTAATAT TGCATTAGCG CACATAGAAA CTAATTTATC TGGCGTGAGC TAA
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Protein sequence | MSERAPVVTI DGPSGAGKGT ISQLLAERLG WKLLDSGAIY RVLALAAIHH NVELDNEDSL TLLAAHLDVQ FITGNGSKGI KVVLEGEDVS NDIRSQECSN AASKVAAFPR VREALLRRQR AFSEAPGLIA DGRDMGTVVF SKAPVKLYLT ASAEERAQRR YNQLQDKGFD VNIDQLLTEI KERDDRDMNR SVAPLVPAED ALVIDTSQIG IEEVLNIALA HIETNLSGVS
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