| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2292 |
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| Symbol | |
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| ID | 6116563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2813880 |
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| End bp | 2815817 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633798 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001760666 |
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| Protein GI | 170726640 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00114874 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.690041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGT TATTGCAATC CCATTTCGGT TTCAGTGAGT TTAGACCCGG TCAAGAACAG
GTCGTTCGTG CCATACTCGA TGGCCATAGC GCTGCCGCTA TATTTCCAAC GGGTTCGGGT
AAATCACTCT GCTATCAACT GCCCGCCCTG TGTTTACCTC ATTTGACCAT CGTTGTGTCG
CCACTGCTTG CCTTGATACA AGATCAGATA AGCTTTCTCA ATAGCAAAGG TATCGCTGCA
GCGAGTATCG ATTCGACCCA AAGTCGAGAG GAAACCAATG AGGTGATGGC AGGTGTTAGA
GCTGGTGTGA TAAAGATCTT AATGATCTCT GTTGAGCGGC TCAATAACGA ACGCTTTAGA
CAGTTTATTG CCGGAGTACC CATTTCGCTA TTAGTGGTCG ATGAAGCCCA CTGTATCTCT
GAGTGGGGAC ATAACTTTCG TCCAGATTAC CTAAAGTTGC CCAGTTATCA GCAAGCATTG
AACATCCCGC AAACCTTACT GTTAACAGCC ACGGCAACCT CCAAAGTCAT AGAGGATATG
GGAAGTAAGT TTGGCATTAA ACCTGAGCAT ATCACCTTAA CGGGTTTCTA CCGACCTAAC
TTACACTTAG GAGTTAAAGG ACTGAGCAGT ACAGATAAAC TTGATTATCT CTCCACTTGG
TTACAAACAC GGCAGTTAAG CTCTGGGATC ATCTATGTCA CGCTGCAGCA GACTGCCGAG
AAGGTTGCTG AGCAACTAAA AGCAAGAGGT ATATCGGCAA AAGCCTATCA TGCAGGCATG
ACATCTGAGG TGCGTCATGC TATTCAGCAT CAGTTTATGT CAGGAGAGCA GGGCATTATT
GTCGCTACAA TCGCCTTTGG TATGGGGATA GATAAAAGCG ATATTCGTTT TGTGGTGCAT
TATGATCTGC CAAAATCTAT TGAAAACTAC GCACAGGAGA TTGGTAGGGC TGGGCGTGAC
GGTGGAGACT CTGAGTGTTT GGTGCTGGCC AACGGGGATA ATCTCAGTAC ATTAGAGAAC
TTTGTCTATG GAGACACCCC AGAACCGTCA GGGATTGGGA TAGTCCTTAA TGAGATAAAA
AAAGCTGCTT TTGAGCATAG GAGCTCGCAA TTACCTCAAT GGGAGCTGGT GTTAAATAGT
CTCTCTAATC AATCCAATAT TCGCCCGTTA TCCCTTAAAA CCTTGCTGGT GTATCTGGAG
CTTCTTAATG TCATCAAGCC TACCTATAGC TACTTTGCCG AGTATAAATT TAAGTTTCTT
CTTCCTGAAG CAGAAGTGAT TGAGTATTTT ACCGCTGAGA GACGAGACTT TATTCGCGCT
ATTTTTACCA CTGCGGACAG GGCAAAAATT TGGTCGAGTG TGAACTTTGA TTCACTGAAT
CAAACTTATG CCAGCGACAG ACAAAGAGTT TTAAAAGCGA TCAATTACCT TGATGAAAAA
GGGATGATTG AGTTGCAATC AAAGCAGATG ACTCAGGTTT ATCAGATTGT TAATAGTGAG
TTTGAACTCA AGGAGCTAAC TGCGAAATTA TCTAAGCGCT TTTTAAACAA AGAAGCCAGT
GAAGTGGCGA GGATCAATCA TCTGGTTGAG CTGTTTACTT CGCCAAACTG CTTGAGTCGC
CAACTTGCTC ATTATTTTTC AGATGATCAA ATGACACAAG ATTGTGGTGT CTGCACCGCT
TGTCGTGGCG AGCGGGCAAT ACTTCCTCCA CCTCCTTACT TAACACCGCT TGAAGAGCAT
GACTTTAACC AAGTTTGCGC TGATGTTGTC GCTAAGCTTG GTACTGCATG TACACCTGTT
TTGGTGGCAC GCTTCCTTTG TGGGCTCACT ACCCCCTTGT TTACCAAGTT AAAGCTTAGA
TCTGCTAAAG GCTATGCTCA GTTTGAGCGA TACCGATTTT CTGATGTAAA GCTATGGGTA
ACCCAAGGGC TAAAATAG
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| Protein sequence | MQQLLQSHFG FSEFRPGQEQ VVRAILDGHS AAAIFPTGSG KSLCYQLPAL CLPHLTIVVS
PLLALIQDQI SFLNSKGIAA ASIDSTQSRE ETNEVMAGVR AGVIKILMIS VERLNNERFR
QFIAGVPISL LVVDEAHCIS EWGHNFRPDY LKLPSYQQAL NIPQTLLLTA TATSKVIEDM
GSKFGIKPEH ITLTGFYRPN LHLGVKGLSS TDKLDYLSTW LQTRQLSSGI IYVTLQQTAE
KVAEQLKARG ISAKAYHAGM TSEVRHAIQH QFMSGEQGII VATIAFGMGI DKSDIRFVVH
YDLPKSIENY AQEIGRAGRD GGDSECLVLA NGDNLSTLEN FVYGDTPEPS GIGIVLNEIK
KAAFEHRSSQ LPQWELVLNS LSNQSNIRPL SLKTLLVYLE LLNVIKPTYS YFAEYKFKFL
LPEAEVIEYF TAERRDFIRA IFTTADRAKI WSSVNFDSLN QTYASDRQRV LKAINYLDEK
GMIELQSKQM TQVYQIVNSE FELKELTAKL SKRFLNKEAS EVARINHLVE LFTSPNCLSR
QLAHYFSDDQ MTQDCGVCTA CRGERAILPP PPYLTPLEEH DFNQVCADVV AKLGTACTPV
LVARFLCGLT TPLFTKLKLR SAKGYAQFER YRFSDVKLWV TQGLK
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