Gene Swoo_2291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2291 
Symbol 
ID6116562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2812963 
End bp2813820 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content42% 
IMG OID641633797 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_001760665 
Protein GI170726639 
COG category[S] Function unknown 
COG ID[COG3021] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0714202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.596547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATTAA GTGTTAAAAC GATACTTGCC TTAGTCATGG GTTTGTCATT TAGCGCCGTG 
ACTTATGTTT ATGTTGTTAA TGAGGCGAAT GGAGAGAGTC AGATCATGAA CAGTGCAAGT
TTACCCTTGT TTCTATCCCA ATGTGTTGAG AAGTCTGTGA GTACTCCATT AGATCTGGAG
GGAAGGCTCA ACGTGGCGGT TTGGAATCTC TATAAACAGC AAAAATCTGG CTGGGACTCT
GTGTTAACTG AACTTGTATC TAGTAACGAG CTCGTGTTGT TGCAAGAGGC TAAGTTATCA
AAGAACTTAG CTCAATTTAT AATAAACAAT AGCCAGCAGG TATTGATGGC CAAAGCCTTT
AAGGTTTTCA AAACACCAAT CGGCGTGATG AACTTGGCCA ATGTGCAAGC AGAGTCTGCT
TGTGCTTATC ATGCAACTGA GCCTTGGATC CGCTTTGCCA AATCTGCGTT GGTTTCACAA
TACCTATTAT CCAATGGCGA AAACTTGATG GTAGTGAATC TGCATGGGAT CAATTTTGAT
TGGCGCTTAA AAGCTTATCG TTCTCAATTT GCACTGTTAG CTGAGCAAAT AAGTGTACAC
ACGGGTCCAG TAATCATGGC TGGTGACTTT AATACATGGC GACAAGGCCG CTTAGATGTG
GTTGGCGAGT TTGCGACAAA ATTAGGATTA CAAGAAGCAA GCTATGAGAC AGATAACCGT
AACCGCGTAT TTGGTAAGGC ACTGGATCAC CTTTATTATC GAGGTCTTAA GTTACAAAAG
GCTCACTCCA ATACGACTGA GGCCTCAGAT CATAATCCGA TACAAGCAAG CTTTACCTTG
ATTGAAAAGC GTGTTTAA
 
Protein sequence
MKLSVKTILA LVMGLSFSAV TYVYVVNEAN GESQIMNSAS LPLFLSQCVE KSVSTPLDLE 
GRLNVAVWNL YKQQKSGWDS VLTELVSSNE LVLLQEAKLS KNLAQFIINN SQQVLMAKAF
KVFKTPIGVM NLANVQAESA CAYHATEPWI RFAKSALVSQ YLLSNGENLM VVNLHGINFD
WRLKAYRSQF ALLAEQISVH TGPVIMAGDF NTWRQGRLDV VGEFATKLGL QEASYETDNR
NRVFGKALDH LYYRGLKLQK AHSNTTEASD HNPIQASFTL IEKRV