Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2291 |
Symbol | |
ID | 6116562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2812963 |
End bp | 2813820 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641633797 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_001760665 |
Protein GI | 170726639 |
COG category | [S] Function unknown |
COG ID | [COG3021] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0714202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.596547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAATTAA GTGTTAAAAC GATACTTGCC TTAGTCATGG GTTTGTCATT TAGCGCCGTG ACTTATGTTT ATGTTGTTAA TGAGGCGAAT GGAGAGAGTC AGATCATGAA CAGTGCAAGT TTACCCTTGT TTCTATCCCA ATGTGTTGAG AAGTCTGTGA GTACTCCATT AGATCTGGAG GGAAGGCTCA ACGTGGCGGT TTGGAATCTC TATAAACAGC AAAAATCTGG CTGGGACTCT GTGTTAACTG AACTTGTATC TAGTAACGAG CTCGTGTTGT TGCAAGAGGC TAAGTTATCA AAGAACTTAG CTCAATTTAT AATAAACAAT AGCCAGCAGG TATTGATGGC CAAAGCCTTT AAGGTTTTCA AAACACCAAT CGGCGTGATG AACTTGGCCA ATGTGCAAGC AGAGTCTGCT TGTGCTTATC ATGCAACTGA GCCTTGGATC CGCTTTGCCA AATCTGCGTT GGTTTCACAA TACCTATTAT CCAATGGCGA AAACTTGATG GTAGTGAATC TGCATGGGAT CAATTTTGAT TGGCGCTTAA AAGCTTATCG TTCTCAATTT GCACTGTTAG CTGAGCAAAT AAGTGTACAC ACGGGTCCAG TAATCATGGC TGGTGACTTT AATACATGGC GACAAGGCCG CTTAGATGTG GTTGGCGAGT TTGCGACAAA ATTAGGATTA CAAGAAGCAA GCTATGAGAC AGATAACCGT AACCGCGTAT TTGGTAAGGC ACTGGATCAC CTTTATTATC GAGGTCTTAA GTTACAAAAG GCTCACTCCA ATACGACTGA GGCCTCAGAT CATAATCCGA TACAAGCAAG CTTTACCTTG ATTGAAAAGC GTGTTTAA
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Protein sequence | MKLSVKTILA LVMGLSFSAV TYVYVVNEAN GESQIMNSAS LPLFLSQCVE KSVSTPLDLE GRLNVAVWNL YKQQKSGWDS VLTELVSSNE LVLLQEAKLS KNLAQFIINN SQQVLMAKAF KVFKTPIGVM NLANVQAESA CAYHATEPWI RFAKSALVSQ YLLSNGENLM VVNLHGINFD WRLKAYRSQF ALLAEQISVH TGPVIMAGDF NTWRQGRLDV VGEFATKLGL QEASYETDNR NRVFGKALDH LYYRGLKLQK AHSNTTEASD HNPIQASFTL IEKRV
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