| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2279 |
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| Symbol | |
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| ID | 6116549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2795569 |
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| End bp | 2796546 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633786 |
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| Product | transketolase central region |
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| Protein accession | YP_001760655 |
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| Protein GI | 170726629 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0946351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGAAA TTAACATGTT ACAAGCCATC AATGATGCAC TCTCTATGGC GATGGAAACC
GATGACAAGA CGATACTCTT CGGTGAAGAT GTAGGCCATT TCGGTGGCGT ATTCAGAGCG
ACTTCTGGTT TACAAGATAA ATATGGTCGT GATCGTTGTT TCAATACCCC ATTAACTGAA
CAGGGTATCG CTGGATTTGC TAATGGTTTG GCCTCAAACG GCATGACCGC AATTGCTGAG
ATCCAGTTTG CTGATTATAT CTTTCCAGCG ATAGACCAAA TTGTGAATGA AACCGCCAAA
TTTAGATACC GTAGTGGTAA TGAGTTTAAT GTCGGCGGTG TCACTTTCAG AACGCCCTAT
GGCGGCGGCA TTGCAGGTGG GCATTACCAC TCGCAATCTC CAGAAGCGTA TTTTACTCAA
ACAGCCGGCC TTAAGGTTGT GGTTCCGCGT AATGCTTATC AAGCTAAAGG GCTGTTGCTG
GCATCGATCC GTGATAAAAA CCCAGTTATC TTCTTTGAGC CTAAGCGTCT GTATCGTGCC
AATATTGGTG AAGTCCCTGA TGGGGATTAT GAGATTGAGT TAGGTAAGGC TGAAGTTGTC
CGTGAAGGTA AGGATATCAC CTTACTTGCT TGGGGCGCTC AGATGGAGAT CATAGAAAAA
GCTGCCGATA TGGCTGCAAA AGAGGGGATC TCCTGTGAAA TCCTTGATCT TCGTACTTTA
GCACCTTGGG ATGTTGAAAC AGTGGCTACA TCAGTCAAAA AGACAGGGCG TCTGCTGATA
AACCATGAAG CACCATTAAC GGGTGGCTTC GCCGGTGAAA TTGCCGCAAC GATTCAAGAG
GAGTGTTTCC TATATCTTGA ATCTCCAATC AGCCGGGTCT GTGGGTTAGA TACTCCTTAT
CCTTTAATTC ATGAAAAAGA GTATATGCCT GATGCGCTCA AGACATTTGA AGCCATTAAA
GCATCGGTAA CATTTTAG
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| Protein sequence | MAEINMLQAI NDALSMAMET DDKTILFGED VGHFGGVFRA TSGLQDKYGR DRCFNTPLTE
QGIAGFANGL ASNGMTAIAE IQFADYIFPA IDQIVNETAK FRYRSGNEFN VGGVTFRTPY
GGGIAGGHYH SQSPEAYFTQ TAGLKVVVPR NAYQAKGLLL ASIRDKNPVI FFEPKRLYRA
NIGEVPDGDY EIELGKAEVV REGKDITLLA WGAQMEIIEK AADMAAKEGI SCEILDLRTL
APWDVETVAT SVKKTGRLLI NHEAPLTGGF AGEIAATIQE ECFLYLESPI SRVCGLDTPY
PLIHEKEYMP DALKTFEAIK ASVTF
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