| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2277 |
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| Symbol | |
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| ID | 6116547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2793125 |
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| End bp | 2794162 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633784 |
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| Product | succinylglutamate desuccinylase |
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| Protein accession | YP_001760653 |
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| Protein GI | 170726627 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2988] Succinylglutamate desuccinylase |
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| TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00519502 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTACAAG CACTAAAAGA GTCTAAAGAC TTTTTACAAC TTACACTCGC CCAACCACAA
CATTTCGATG AAACATTCAC ATTTATGCTT GGCTCTCATA CTCAAGTGGA AGTATGGGAT
ACTGGAGTTA TTGTGTTTGA ACCTAAGGTC GCTCGGGGGA AAGACATTGT ACTCTCATGT
GCTGTACACG GTAATGAAAC CGCGCCTATA GAGTTATGTA ACGGACTGAT AAAGTCACTG
CTTGAAGAGA GGTTAATTGC GGAGCAAAGG GTACTTTTTC TTTTTGGTAA TCCGCCAGCC
ATCATCAATG GCACCCGCTT TATTGATGAA AACCTTAATC GCCTGTTTAA CGGAGCTCAC
TCTGTGGGTG AAGGGTTAGT TAACCCTGAA CGTATTAGAG CAAAGAAACT TGAGTTTTAC
GTTGATAAGT TTTTTAGTTC ATCAAAAGAT AACAGCCATA AAATTCATTA CGATCTTCAC
ACCGCTATCC GTGGTTCTAA ACACGAAAAA TTCGCTATCT ACCCATACAG ACCAGGTCGT
AAGTACAGTG GTGAGCAGAT CATGTTTCTT GAAGCATGCG GTATCGATAC TGTGTTATTT
CATCATGAGC CCACCACAAC ATTTAGCTAC TTTTCATCCC TTAATTATCA AGCCGATGCA
TTTACCATTG AGTTAGGCAA AGTGCTTCCA ATGGGTCAAA ATGATATGAC GCGCTTTATC
GCGCTCAACG AGATGCTTAG CCGCTTAATC GGCAATAAGT CCTTAGAACT GCCAGATTTT
AATGCTAAAA CGGTGAATCT GTATCAAGTG TGTCGAGCAA TTAATAAAGG CTTTGATGAT
TTTGAGTTTA CTTTCGCCAA TGATGTAGAA AATTTTACCT CATTCCCTAA GGGCTATATT
TTAGCCAAAG AGGGCGGGGA GAACATCAAG GTTGAACATG AGGTTGAAGC CATCGTCTTC
CCTAATGCCA AGGTACCAGT GGGCCAACGA ACGGTTTTAT GTTTAAAGCC TGCCTCTACT
GAGAATATAG ACGGTTAA
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| Protein sequence | MLQALKESKD FLQLTLAQPQ HFDETFTFML GSHTQVEVWD TGVIVFEPKV ARGKDIVLSC
AVHGNETAPI ELCNGLIKSL LEERLIAEQR VLFLFGNPPA IINGTRFIDE NLNRLFNGAH
SVGEGLVNPE RIRAKKLEFY VDKFFSSSKD NSHKIHYDLH TAIRGSKHEK FAIYPYRPGR
KYSGEQIMFL EACGIDTVLF HHEPTTTFSY FSSLNYQADA FTIELGKVLP MGQNDMTRFI
ALNEMLSRLI GNKSLELPDF NAKTVNLYQV CRAINKGFDD FEFTFANDVE NFTSFPKGYI
LAKEGGENIK VEHEVEAIVF PNAKVPVGQR TVLCLKPAST ENIDG
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