Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2274 |
Symbol | |
ID | 6116544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2790035 |
End bp | 2790574 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641633781 |
Product | replication initiation regulator SeqA |
Protein accession | YP_001760650 |
Protein GI | 170726624 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3057] Negative regulator of replication initiationR |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00129565 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATA TAGAGGTTGA TGAAGAGTTA TATCGCCTTA TTGCCAGTAA GACTGAAAGG ATCGGCGAGA GTGCTTCTGA AATCTTACGT CGACTCCTTG GTTTGGAAGT GGAAGCATCG GCAACGCAAG AGAAAGATGA GCCCGAGGTG ATTAGCCAAC CCGGTTTAGA AGAGACGGCA GATGTTGAAG ATAAGCCAAG ATTTATCGAC CTTCATTCAA GCATCAATAA AGAGGAGTTA GCGGCGGCAA AAGGTGCCGT TGGACGTTTC CTGTTTATCC TTGAAGCTGT CTATTTGGCT TCGCCTGAGC AGTTTGCACA AGTACTTAAG ATTAAAGGTC GTGACAGACT CTATTTTGCC ACATCAAAAC AATCTCTGTT AAAAGCCAGT AAATCAGCAA ATCCAAAAGA GATTGGCCAA AGTGGTTACT GGGTAACGAC AAATAATAAC ACCGCTAAAA AGCGTACGAT TTTGACAGAA GTTTTGCACC AATACGGCAC TGTAGAGGCG CAAATTGAGT CAATCACTCG CAATATTTAA
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Protein sequence | MKYIEVDEEL YRLIASKTER IGESASEILR RLLGLEVEAS ATQEKDEPEV ISQPGLEETA DVEDKPRFID LHSSINKEEL AAAKGAVGRF LFILEAVYLA SPEQFAQVLK IKGRDRLYFA TSKQSLLKAS KSANPKEIGQ SGYWVTTNNN TAKKRTILTE VLHQYGTVEA QIESITRNI
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