| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2263 |
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| Symbol | |
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| ID | 6116533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2777452 |
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| End bp | 2780499 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633770 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001760639 |
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| Protein GI | 170726613 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.938234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA AGCTGATCAC CATAGCAATA CAAACCGCCA TCATGGGGGG CGCATTAAGC
TTAGCGCCAC AAGTATATGC TGCCGATGAC ACAGAGATTG CAAAACCCAA ACTTGAAGCC
ACTGCAGATG AACAGGGAAA AGAGCCAGAG ATTCAAGAAA AAATTACTGT AACAGGTTCA
CGTCTGCGTC GAGATAGTTT TAGTATAACA ACACCTCTAG CAGTGTTAGG CAGAGATGAC
ATCGAAGATA CAGGTTTAGG CTCTCTGGCA GAGATTTTAG TTGAGGAGCT TCCTCAAATA
TCAGAAGGTA GCAGTAACAG TAACTCACAA TCCAGTGTAC AAAATACCGG CCTATCTACA
ATTGATCTTC GTGAGCTAGG AACCAACCGG ACATTAACCT TAATTGATGG ACGACGAGTC
GTGTCTAATA GTTACTCAGG TAACTATGTC AGCCTATCAA CTATCCCTTC AGGTATGGTT
GAAAGAGTCG AAGTCATTAC AGGTGGCGCA TCAGCAGCTT ATGGCTCAGA TGCTATTGCA
GGTGTAGTAA ATATCATCAC TCAGCAAGAT AAAGAGGGCT TCTCTTTTAA AGCTCGTGGC
GGCGAGAGTA CAGAGGGCGG TGCTAAAGAG TTCACCTTAG ACTTAGATTA TGGTACTGAA
TTTGCTGATG ATCGTGGCTA TCTCTTCTTT AGCTCAACTT ACGATAAACA ATATGGTCTA
TCTTATTGGG ATCGTGACCG TGCGCAACAG CAAGAATCTT GGCGATACAA TACGGCAGAG
ATGTGCAATG CCATGTACAG TGAAGATAAC ACCTCAAGCA AGGGAACTTG TATGAGAGAC
ATGACACAAG CAGATTGGCG TAATCTAAGT GACTCCATTG CAGGTGGTGT GTTTGATGAA
AAAAGTAGTT ATAAGCCGGA CTCTGGTTTT TGGTACGATG AAAACGGTCT ACGAGATGAC
TGGCATGAAG AGAAATATGG TCGTGACTTC AATCAGTTTG TGATGTTAAA AGTCCCAGAT
GAAGCTATCT CGGCTGCAAT TAAAGTTGAC TTTGAGCTAA CTGACGACAT CCAAAGCTAT
TTTCAAGTTC AGTACAGTGA AAACCGCTCT ATTAACCAAA AATCACCTGA AAGCGAAGAT
GAGTTCGATG GCATCGTTGT TATTGACCCT GTAACAGGGG AAAGCAGCCA GATTGGAGCT
GGACGAATCC CGAAAAATAA CCCTTATATG CCACAAGAGA TCTACGATCA AGCTAGCAGT
AAGGGCGTAA AGTGGGATAG AGGTTTCGAT GAAGTTGGCA ATATCATCAA TGATAATACC
CGTAAAACCA TTCGTTCATG GGCTGGGCTT CAAGGTACAA TATTTGATGG AAACTGGGAC
TGGGACCTAT CAGTTGGCTA TGGTAAATTT ACCCAAGAGC AGACCCGTTA TAATGAGCTA
TACATAGCAA ATCTTACTCA TGCTTTAAAC GCAGAAAAGC TCGATGACGG CACAATACAG
TGCGCTGATG CCGATGCTCG TGCTGCAGGT TGTGTGCCTA TTAATCTGTT TGGCGAAGGT
TCTATCACAC CCGAAGCAGC CGATTATATA CGCGCAACCC CCACCATTTC GACAGATGTA
CAACAAACAA CTGTACTTGG TTATATTGCT GGTGACCTTT TTGAGATGCC AGCAGGGCCA
GTTGCTTCAG CTTTCGGTTT TGAATATCGC AAAGATGAAC AAAGTGTGGA TACGAATGTG
CCATTAGGTG GCGTTTCATT CAACTATGTA CCGACTTTCT CTGGCGATGT CAGCGTTTAT
GAGGTGTTTG GTGAAGCAGC CTTTCCACTA CTTAAAGATG TAGCAGGAGC TAAGAGCCTG
ACAGCAGAAG TATCGGCACG TCTAGCCGAT TATAGCTGGT CTGGTACGGG ACTAATTCAG
AGCTATAAAA CAGGGGTGAC TTGGCAACCA GTCGAAGGTT ATGCAATACG TGCTAACTGG
GCAAGAGCTC AGCGCGCACC AAGTATTACT GAACTACTAT CACCTCCGCG TGGCGACTAT
GATAGTTTCG ATGATATCTG TGAAGGCACA ACATTGACTT CTACCGATGC AGGCCATGAC
AACTGTCGCT TAGAGCCTGG TATAGCTGCG GTTATCGCGG ATGGCAGTGA GTTCGAAGAT
GATAATAACG GTTACTCCCC TAATGTTGGT AACTCAGAGC TAAAAGAGGA AACAGCAGAT
ACTTACACTC TAGGTATCAC ATTAGCACCT GAGTTTGCCG AGGGATTACG TATTGCAGTT
GACTATTACG ACATCACGAT AAGCGATGCG ATATCTTCTT TCTCGAATGA AGATATTATT
GATTACTGCT ATAACTCTTC ACTTGATTTT GGTGACGATA ATAATTTCTG TAATGATATT
CAACGTGATG CAGAGGGGCA AATAACTACT GTTAATCAAC GTGTTTATAA TGTTGATGAG
ATCAAAACTA ATGGTTTTGA TTTCGCCGCA GAGTACAGGT ATGAACTCGA TAAATATGGC
TCATTGAAGT TTAAAGCTGA TTGGACACAT GTCATTGGTT ACGAGCAAAC AGTGCAAAGC
CCTGAAGGCC CAGCAACAAC TAATTATGAA GGGGATCTTT CACAAGATAT CTTTGAAGAT
AAGGTAACTG CATCACTTTC ATGGTACTAC GACGATGCTT GGCGAGTTCG TTGGAGCACA
CGCTTTAAGA GTGCTGTTGT TGCAAGCCGT TCAGTATACG ATGATTGGGA GAAAGCAATC
ACCAAAAATA ATGAATACTG TGCAGATGGA AGTGATAAGT GCGTACTGGA GCCAGAGGCA
TTAGATGACT CATTCTATAA CTTACCTTCA TACATCACCC ACAATCTGTC AGTATCCTAT
ACGTTAGATC TAGCTAATGA TGGCGAGCTT CGCTTCTTCG GTGGTGTGAA TAACATCTTC
GATGACAGAG GTCCATTCAT GGCTATTGGC GGAAGAGGTA ATTTCGACAG CAACTATGGT
GGTGGTAAAG GTCGCTTCGC TTATGCAGGC GCAGAGTTTA AGTTCTAA
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| Protein sequence | MNKKLITIAI QTAIMGGALS LAPQVYAADD TEIAKPKLEA TADEQGKEPE IQEKITVTGS
RLRRDSFSIT TPLAVLGRDD IEDTGLGSLA EILVEELPQI SEGSSNSNSQ SSVQNTGLST
IDLRELGTNR TLTLIDGRRV VSNSYSGNYV SLSTIPSGMV ERVEVITGGA SAAYGSDAIA
GVVNIITQQD KEGFSFKARG GESTEGGAKE FTLDLDYGTE FADDRGYLFF SSTYDKQYGL
SYWDRDRAQQ QESWRYNTAE MCNAMYSEDN TSSKGTCMRD MTQADWRNLS DSIAGGVFDE
KSSYKPDSGF WYDENGLRDD WHEEKYGRDF NQFVMLKVPD EAISAAIKVD FELTDDIQSY
FQVQYSENRS INQKSPESED EFDGIVVIDP VTGESSQIGA GRIPKNNPYM PQEIYDQASS
KGVKWDRGFD EVGNIINDNT RKTIRSWAGL QGTIFDGNWD WDLSVGYGKF TQEQTRYNEL
YIANLTHALN AEKLDDGTIQ CADADARAAG CVPINLFGEG SITPEAADYI RATPTISTDV
QQTTVLGYIA GDLFEMPAGP VASAFGFEYR KDEQSVDTNV PLGGVSFNYV PTFSGDVSVY
EVFGEAAFPL LKDVAGAKSL TAEVSARLAD YSWSGTGLIQ SYKTGVTWQP VEGYAIRANW
ARAQRAPSIT ELLSPPRGDY DSFDDICEGT TLTSTDAGHD NCRLEPGIAA VIADGSEFED
DNNGYSPNVG NSELKEETAD TYTLGITLAP EFAEGLRIAV DYYDITISDA ISSFSNEDII
DYCYNSSLDF GDDNNFCNDI QRDAEGQITT VNQRVYNVDE IKTNGFDFAA EYRYELDKYG
SLKFKADWTH VIGYEQTVQS PEGPATTNYE GDLSQDIFED KVTASLSWYY DDAWRVRWST
RFKSAVVASR SVYDDWEKAI TKNNEYCADG SDKCVLEPEA LDDSFYNLPS YITHNLSVSY
TLDLANDGEL RFFGGVNNIF DDRGPFMAIG GRGNFDSNYG GGKGRFAYAG AEFKF
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