| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2255 |
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| Symbol | |
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| ID | 6116525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2769047 |
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| End bp | 2770813 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633762 |
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| Product | methanol/ethanol family PQQ-dependent dehydrogenase |
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| Protein accession | YP_001760631 |
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| Protein GI | 170726605 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.217629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAA CACGCAAAAA TAATAAGTTA TCATTATCTC TTTGTATTAC ATTAGCACTC
TGTGGTACTG CGAGTGCTAA TGTAACCAAT AAGGATATCG CTAACGACCA GATGACAACA
GATGATGTTG TCTCTTATGG AATGGGACTA CAAGGTCAAA GATATAGCCC TCTTACTAAG
ATTAATACCA GTACAGTTAA AGAGATGCGA CCCGCTTGGG CTTTCTCCTT AGGGGGCGAG
AAACAACGTG GTCAAGAATC ACAGCCAATG ATCAAAGATG GCGTCATGTA TATTACTGGC
TCCTATTCGC GTGTATACGC CATCGACGCC AGAACAGGCG AAGAGTTGTG GCAATATGAC
GCTAGATTAC CCGATGGGAT CATGCCCTGC TGTGATGTGA TCAACCGTGG TGTAGCCCTC
TATGATGACC TTGTAATTTT TGGCACCTTA GACGCTAAGC TCGTTGCACT AAATAAAGAT
ACTGGCAAAG TCGTATGGAA GAAGAAAGTT GAAGACTACA AAGCCGGCTA CTCAATCACT
GCAGCACCAA TTGTCGTCAA AGGCAAGATT ATAACCGGTG TCTCTGGTGG TGAGTTCGGC
ATAGTCGGTA AAGTCAGAGC CTATGATGCT AAAAATGGTC AAATCGTATG GGAGCGCCCT
ACGGTCGAAG GCCATATGGG CTATATCTGG AAAAATGGCA AAAAGGTCGA TAATGGGATC
TCCGGAGGCA AACCCGGTCA AACTTGGCCT GGGGATCTGT GGAAATCTGG CGGCGCAGCG
CCATGGCTTG GAGGAACTTA TGATGCCGAT GTGGATCTCC TCTTCTTCGG TACAGGTAAC
CCTGCGCCAT GGAACTCACA CCTGCGTCCA GGTGACAACT ACTTCTCAGC GTCACGCTTA
GCTATCGATC CCGACACAGG AAAGATTGTC TGGCATTTTC AGACCACGCC ACATGATGGC
TGGGATTATG ATGGAGTCAA TGAGCTGATC CCATTTGATT ACAAAGAGAA AGGTAAAACC
ATTAAAGCGG CAGCAACCGC CGACCGTAAT GGCTTTTTCT ACGTACTCAA CCGTGAAAAT
GGCGACTTTA TCCGCGGCTT CCCTTTCTCC GATAAGATCT CATGGGCTTC AGGCTTAGAT
GAAAACGGCC GACCTATTTT TGTTGATGCC AATCGCCCGG GTAATCCTAT GGATTCAGCG
GATGGTAAAC AGGGTAAAAC CGTTGTTGCA GCTCCCTCCT TCCTAGGAGG AAAAAACTGG
ATGCCGATGG CCTATAGCCA AGATACAGAG CTCTTCTATG TCCCCTCAAA TGAGTGGGAG
ATGGACATCT GGAATGAACC AACCGCCTAT AAAAAAGGCG CTGCCTATTT AGGTGCTGGC
TTTACGATTA AAGCGATTAA TGATGACTAT ATTGGTGTAC TTAAAGCGAT AGATCCTAAA
ACAGGTAAAG AGGTCTGGCG TTACAAAAAC TACTCCCCTC TTTGGGGAGG TGTACTAACT
ACAGCTGGTA ACCTCGTCTT TATGGGTAAC CCTGAAGGAT ATCTGCTGGC TTTTAATGCC
AAGACAGGTG AGCTTAAATA CAAGTTCAAT ACTGGTTCTG GCATCGTTGG ATCTCCTGTT
ACCTGGGACA TGGATGGTGA GCAGTATGTT TCAGTCCTCT CAGGTTGGGG CGGCGCAGTA
CCTCTTTGGG GAGGCGATGT GGCCAAGCGT ATTAAGCATC TAAATCAAGG CGGTAGTGTC
TGGACCTTTA AGCTACCTAA AAGCTAA
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| Protein sequence | MIKTRKNNKL SLSLCITLAL CGTASANVTN KDIANDQMTT DDVVSYGMGL QGQRYSPLTK
INTSTVKEMR PAWAFSLGGE KQRGQESQPM IKDGVMYITG SYSRVYAIDA RTGEELWQYD
ARLPDGIMPC CDVINRGVAL YDDLVIFGTL DAKLVALNKD TGKVVWKKKV EDYKAGYSIT
AAPIVVKGKI ITGVSGGEFG IVGKVRAYDA KNGQIVWERP TVEGHMGYIW KNGKKVDNGI
SGGKPGQTWP GDLWKSGGAA PWLGGTYDAD VDLLFFGTGN PAPWNSHLRP GDNYFSASRL
AIDPDTGKIV WHFQTTPHDG WDYDGVNELI PFDYKEKGKT IKAAATADRN GFFYVLNREN
GDFIRGFPFS DKISWASGLD ENGRPIFVDA NRPGNPMDSA DGKQGKTVVA APSFLGGKNW
MPMAYSQDTE LFYVPSNEWE MDIWNEPTAY KKGAAYLGAG FTIKAINDDY IGVLKAIDPK
TGKEVWRYKN YSPLWGGVLT TAGNLVFMGN PEGYLLAFNA KTGELKYKFN TGSGIVGSPV
TWDMDGEQYV SVLSGWGGAV PLWGGDVAKR IKHLNQGGSV WTFKLPKS
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