| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2252 |
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| Symbol | |
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| ID | 6116522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2763802 |
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| End bp | 2764719 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633759 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
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| Protein accession | YP_001760628 |
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| Protein GI | 170726602 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.544865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGATAC TCATTCTTGG TTCAGCAGCG GGTGGCGGAT TCCCGCAATG GAACTGTCAT
TGCGATAATT GTGAAGGAGT ACGTAGTGGG CGCATAAAAG CCCAAGCAAG GACCCAATCC
TCAATAGCGG TCAGTCCAGA CGGCGAAAAC TGGGTACTGA TCAATGCCTC TCCAGATATA
CGTCAACAGA TCAATCAATC ACCACAACTC TGGCCCGATG AAGGTCAAAG AGGCACAAAG
ATAAGAGCTG CAGTGCTCTC TGATAGCCAA ATCGATCACA CCACAGGTCT ACTGACCCTT
AGAGAGGGAC TCCCTCTTCC TGTTTACTGC ACTGATGTTG TTCATGAAGA CTTATCTGGA
GCTTATCCAC TTTTTAACCT ACTGAGTCAT TGGCATGGCG GACTGACACA TCGAGCCATA
GGAACAGATC CTCAAACTCC CTTTACTGTT GAACAGGTAT CAGGCTTGGT GTTTTATCCC
GTCCCATTAG AATCGAATGC ACCACCCTAC TCTCCCTACC GTGATGACAT CGTACCCGGC
AATAATATTG GCCTCAAAAT TCTTGATAGC AATACTGGAA AGTATCTCTT TTATGCACCA
GGCATCGTCA AATCAAACTC GCTTGTAGAA GCCATGTTAG CTGACGCCGA ATGCGCCTTA
ATCGATGGTA CGCTTTGGTT AGACGATGAA ATGATAGCCA AAGGCTTTAG TAATAAGCTA
GGTTCAGACA TGGGACATAT GCCAGTAAAT GGTGAGTTTG GCACTGTAGC ACTGCTGAAA
AAATTTGATA TTAAACACAA AATACTGATC CATATTAACA ATACAAACCC TATTTTAAAT
GAAGAGTCTG CAGAGCACAG TTATGTGATT AATAACGGTG TTGAGATCGC GACCGACGGT
ATGGAAATAT TCATATAG
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| Protein sequence | MQILILGSAA GGGFPQWNCH CDNCEGVRSG RIKAQARTQS SIAVSPDGEN WVLINASPDI
RQQINQSPQL WPDEGQRGTK IRAAVLSDSQ IDHTTGLLTL REGLPLPVYC TDVVHEDLSG
AYPLFNLLSH WHGGLTHRAI GTDPQTPFTV EQVSGLVFYP VPLESNAPPY SPYRDDIVPG
NNIGLKILDS NTGKYLFYAP GIVKSNSLVE AMLADAECAL IDGTLWLDDE MIAKGFSNKL
GSDMGHMPVN GEFGTVALLK KFDIKHKILI HINNTNPILN EESAEHSYVI NNGVEIATDG
MEIFI
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