Gene Swoo_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2244 
Symbol 
ID6116514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2753886 
End bp2755049 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content45% 
IMG OID641633751 
Producthypothetical protein 
Protein accessionYP_001760620 
Protein GI170726594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00780983 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0297405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATA CACAAGCTAA ATTGAGTTTA CTGAGTGTCG CTATCTGTAT GACGACATTT 
AATGCAAGTG CTGCATTAGA GATCTATGAA AATGATGGCA TGTCTTTTAG TGCCGATGGC
TTAGTCAATG CTTTCTATGC TAACAGCTCT ATTGAGAAAA CTGACGCAGA GGGGGCGACA
TCAGAACGTG ACCAATCTCG CGTCAGAACG GGCTTTTTAC CCAATAACAT AGGCTTTAAC
TTCTCTAATC AACTCTCTGA TATGAAAATT GGCATGCGCT CCTCTTTCTG GGTGTCGATA
AGTGATGCTG ATAACCATCG TGATGCATCT CCAGCGGATC TTGGAACAGG ATCTTTGATC
GATATCCGTC AGTTCTATGG CACTGTTAGT GGCGATTGGG GAGAGTTATT AGTCGGTAAG
GATTTTGGTT TACTTAACCG AGCGAATATT TTAGGTGACG AACTCCTGTT GGGCTTTGGC
CAAACTTCTG ACTTTTTTGG CCTTGTTGAT GGCGGCAATG TCTCATTTGG TAATATCAGC
ACAGGTTATA CCTATCCCTT TCCTAAGTCG CAAATAACCT ATCGATCGCC GGATCTAAAT
GGGTTTAAAA TTGCCGTTGG ACTGATGGAT CCCAACAAGG TCGCTGCGGA TTCCTCTGAA
GAGCTACCTC GAGCTGAAGC CGAACTCATA TATAGCACTG AGATGGATAA GGTAAACTTG
AAAGCTTGGG TCAGTGGTGC GACTCAGTCC AGTGAAGTGG ATGATGTGAA GCAGAACCAA
TCGGGCGTGG GCTATGGTGC CAATGTCAAG TTTTCCGGCT TCTCCTTCAC GGCATCAGGG
TTTCAAACTA AAGGGTTAGG GCACATTGCT GGACTCGATC ACCTAGTGGG TGATGAGTCA
ATAAAGTCTG ATGGCTATCT GCTACAGGCT GCTTATACGC TCGATAGTAA CCGGTTTGTT
TTGACCTATG GTGAGTCAGA AGTCGAGAAC ACTGACAGTA TTCTTGATGC TAAGCACTCT
AATATCGGTA TCGCTTATTT CAGAACCATA CGCCCAGGAC TCACTGCGGT TGTTGAATAT
AACCAGACCG AAGCGGATGT GGCTAACTCC TTAGTTGGCG AAGAGAACAA TACACTCTCT
ATCGGCGCAG TGTTCACATT CTAG
 
Protein sequence
MMNTQAKLSL LSVAICMTTF NASAALEIYE NDGMSFSADG LVNAFYANSS IEKTDAEGAT 
SERDQSRVRT GFLPNNIGFN FSNQLSDMKI GMRSSFWVSI SDADNHRDAS PADLGTGSLI
DIRQFYGTVS GDWGELLVGK DFGLLNRANI LGDELLLGFG QTSDFFGLVD GGNVSFGNIS
TGYTYPFPKS QITYRSPDLN GFKIAVGLMD PNKVAADSSE ELPRAEAELI YSTEMDKVNL
KAWVSGATQS SEVDDVKQNQ SGVGYGANVK FSGFSFTASG FQTKGLGHIA GLDHLVGDES
IKSDGYLLQA AYTLDSNRFV LTYGESEVEN TDSILDAKHS NIGIAYFRTI RPGLTAVVEY
NQTEADVANS LVGEENNTLS IGAVFTF