| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2236 |
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| Symbol | |
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| ID | 6116506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2743601 |
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| End bp | 2745778 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633743 |
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| Product | malate synthase G |
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| Protein accession | YP_001760612 |
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| Protein GI | 170726586 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.105215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000237571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACATCAC GAGTGCAGGT TGGCAGTTTA CAGGTGGCAC AAGTGCTATT TGATCTGGTC
AATGACAAGA TCCTTCCAGG AACGGAGATC ACCGCGGAGC GCTTTTGGAG TCAGTTAGAA
GCGATAGTGA GTGATCTTAC GCCTAAAAAT AGAGCGCTAC TTCAAAAGCG TGATGAGCTA
CAAGCTAAGA TAGATGAGTG GCATCTAAAT CAACACTCAA ACCAGCAGCA GTTCGATCTT
AATAGCTATA AAGAGTTTTT AACTGAAATA GGTTATCTAG TGAAAGTTGG TCCAGACTTT
TCAATAGAGA CAGAGAATGT TGATACTGAA ATAGCAGAAC AAGCTGGTCC TCAGTTAGTT
GTGCCTGTTA AAAATGCCAG ATTTGCCCTT AATGCAGCTA ATGCACGTTG GGGAAGTTTG
TATGATGCAC TTTATGGCAC TGATGCTATC AGTGAAGAGG GCGGGGCTGA GCTAGGTTCA
AGTTATAACC CTGTTCGTGG TGATAAAGTT ATTGCATTTG CAAAGCAACA TTTAGATCAA
TTAGCGCCAC TTTCCATAGG TAGCCATAGT GAAGCCCGTC ATTATCAAGT GGCTGGGGGG
AAGTTACTTG TGACTTTACT CGATGGCTGC GATACTGGCC TGCAGGAGCC TGAGAAGTTC
GTCGGTTTCC AAGGTGACAA GATCTGCCCA TCGGCTGTTC TGCTGAAAAA TAATGGTCTG
CATGTGGAGA TCCAGATAGA TAAAGATCAT CGTATTGGTA AACAGGACTC TGCCAATGTT
AAAGACCTGC TGGTGGAAGC GGCTGTAACC ACCATTATGG ATTGTGAAGA CTCTGTCGCT
GCGGTCGATG CTGAAGATAA GTGTGAAGTG TATGAAAACT GGCTCGGCCT AATGCAAGGT
AACCTCAATG CTGAGCTAAA CAAAGGCGGT AAAACGATTA CCCGTGAGCT GAGTCAAGAC
AGAGATTACC AAGCACCTTT AGGGGGCAAG TTGACCCTGC CCGGACGTAG CTTACTGTTT
GTTCGTAATG TGGGTCACCT GATGACAAAC AACGCGATAC TAGACAAAGA TGGCAAAGAG
ATCCCAGAGG GGATTTTAGA TGGCATGGTA ACAGTGCTTG CCGCCATACA TGATCTTCAA
GGTCATAATA ATGGTCGTTC AAATAGCCGT GTAGGCTCTG TCAATATTGT GAAACCTAAG
ATGCACGGGC CTGAAGAGGT CGCATTTACT TGTGAGCTGT TTACCCGTAT TGAGGATGCC
CTTAAGTTGT CTCGAGATAC CATTAAGCTT GGGATCATGG ATGAGGAGCG TCGTACTACC
GTGAACCTTA AAGAGTGTAT CCGAGTTGCC AAAGATCGTG TGGTATTTAT CAACACAGGT
TTTCTCGATA GAACTGGCGA TGAGATCCAC ACCTCGATGC TGGCAGGGCC ATTTGTGCCT
AAATCTATGA TGAAGCAGCA AGCTTGGATC AATGCTTATG AAGATTGGAA TGTCGATATT
GGCTTAGCAT GTGGCTTGCC TGGACGTGCT CAGATAGGCA AAGGTATGTG GGCCATGCCA
GATGAGATGG CCAAAATGCT TGAGCAGAAG ATTGGGCACC CTAACGCCGG CGCTAACACT
GCTTGGGTTC CATCGCCAAA TGGCGCAAGT TTGCACTCAA TTCATTACCA TAGAGTCAAT
GTGCTTGAGC GACAAAAAGA GCTAGCTCAA AGAGAGCGGG CAAGTTTGGA TGATATATTA
ACGATCCCCT TACTTGAAAA TCCAGCTTCG CTCACCCATG AGGAGGTTGA GAAAGAGCTA
GATAACAATG CTCAAGGTAT TTTAGGTTAT GTGGTGCGCT GGATAGATCA AGGTGTGGGC
TGCTCTAAAG TGCCAGATAT TAATAATGTT GGATTGATGG AGGATAGGGC GACACTGCGG
ATCTCCTCCC AATATATTAC TAACTGGCTT GAGCATAAGA TCTGTACAAA GGAGCAAGTG
CTTGCCTCAC TTAAGCGAAT GGCTGTTGTG GTTGATGGTC AAAATAGTGC TGATAATGAA
TATCAAGCTA TGGCACCACA ATTCGATGGC ATCGCCTTTA AAGCGGCTTG TGATCTGATT
TTTGAAGGTA AGGAGCAGCC ATCTGGCTAT ACAGAGCCTT TGCTACACGC ATACCGAATC
GAGGCTAAAG CGAGCTAA
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| Protein sequence | MTSRVQVGSL QVAQVLFDLV NDKILPGTEI TAERFWSQLE AIVSDLTPKN RALLQKRDEL
QAKIDEWHLN QHSNQQQFDL NSYKEFLTEI GYLVKVGPDF SIETENVDTE IAEQAGPQLV
VPVKNARFAL NAANARWGSL YDALYGTDAI SEEGGAELGS SYNPVRGDKV IAFAKQHLDQ
LAPLSIGSHS EARHYQVAGG KLLVTLLDGC DTGLQEPEKF VGFQGDKICP SAVLLKNNGL
HVEIQIDKDH RIGKQDSANV KDLLVEAAVT TIMDCEDSVA AVDAEDKCEV YENWLGLMQG
NLNAELNKGG KTITRELSQD RDYQAPLGGK LTLPGRSLLF VRNVGHLMTN NAILDKDGKE
IPEGILDGMV TVLAAIHDLQ GHNNGRSNSR VGSVNIVKPK MHGPEEVAFT CELFTRIEDA
LKLSRDTIKL GIMDEERRTT VNLKECIRVA KDRVVFINTG FLDRTGDEIH TSMLAGPFVP
KSMMKQQAWI NAYEDWNVDI GLACGLPGRA QIGKGMWAMP DEMAKMLEQK IGHPNAGANT
AWVPSPNGAS LHSIHYHRVN VLERQKELAQ RERASLDDIL TIPLLENPAS LTHEEVEKEL
DNNAQGILGY VVRWIDQGVG CSKVPDINNV GLMEDRATLR ISSQYITNWL EHKICTKEQV
LASLKRMAVV VDGQNSADNE YQAMAPQFDG IAFKAACDLI FEGKEQPSGY TEPLLHAYRI
EAKAS
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