| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2235 |
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| Symbol | |
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| ID | 6116505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2742410 |
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| End bp | 2743354 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633742 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001760611 |
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| Protein GI | 170726585 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.130762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000140411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATATAT CTAGAGTCGA CCTCAATCTG TTGGTGTATT TTGATGTTTT GCTAAGAGAG
TTAAATGTCA CGCGAGCAGC AGATCAATTA GGAATAAGTC AGCCTGCAAT GAGTAATGGC
CTTAAAAGGC TACGTGTCCT GTTTGATGAC CCTCTGCTTA TTCGTACTAG TAAAGGGATG
ACGCCCACAG AGCGTGCATC TGAACTAAAA CCTGTGATCC GTGAGCTATT AGTAGGTTTA
GAGAAAGCTG TAGAGCCCAA AGCCAAGTTT AATCCCCGCG AAAGTGAACA GGTGTTTCGT
ATGATGGCCT CAGATTATGC AGAGGCAACA TTAATACCTT TATTAATCGC TAGGTTACGC
AATGAAGCTC CCAAAGTGAT TTTAGATATT ATGACGCCTA GTGATGTTAA CTTTCCCGAT
GTGGAGCAGG GACGGGTGGA TATGGTGATT AACCGTTTTG ATAGTATTCC ACTCTCTTTT
CATCAAAAAG TACTCTGGAA AGACAGTTTT AGCTGCTTAA TTAATCGTAA TCACGATGTA
TTGAAAAACT TTAACCTAGA AAACTACCTA AATGCTCACC ATGTTTGGGT GAGTAAAACC
GGTATGGGGA TTGGCGTGGG GATGGATCCT GATGATGTTC AGCGTCTCGG TTGGGTTGAT
GAAGCATTAG CTAAAATAGG GGCAAAACGC AGGATCACTG TATTTACTCG CCACTATCAG
GCTGCAAGTT CATTGGCTGA GAGACAAGAT CTGATCGCAA CAGTGCCTAG TAAAATGGCT
AGATTACAAC AAGATAACAG TAGAGTGTCG ATTATACCGC CGCCTTTTGA TATCCCGCCC
ATTGAGCTTA CTATGGCTTG GAGTCCGCTA CTACAACATA ACCCTGCCCA TAAGTGGATG
CGTGAACTCA TCACAGAAAC AGCCCGTATC ATTGACCGTT TTTAA
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| Protein sequence | MNISRVDLNL LVYFDVLLRE LNVTRAADQL GISQPAMSNG LKRLRVLFDD PLLIRTSKGM
TPTERASELK PVIRELLVGL EKAVEPKAKF NPRESEQVFR MMASDYAEAT LIPLLIARLR
NEAPKVILDI MTPSDVNFPD VEQGRVDMVI NRFDSIPLSF HQKVLWKDSF SCLINRNHDV
LKNFNLENYL NAHHVWVSKT GMGIGVGMDP DDVQRLGWVD EALAKIGAKR RITVFTRHYQ
AASSLAERQD LIATVPSKMA RLQQDNSRVS IIPPPFDIPP IELTMAWSPL LQHNPAHKWM
RELITETARI IDRF
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