| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2230 |
|---|
| Symbol | |
|---|
| ID | 6116500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2737528 |
|---|
| End bp | 2738100 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641633737 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001760606 |
|---|
| Protein GI | 170726580 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4929] Uncharacterized membrane-anchored protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.389542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000590839 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGTT TAGTGACGCC ATTATTAAGA AAAGGCAGCC CAAGCAAAAG GTTTGTCCAG
ATTGGCTTGT TCTTGACTAT TTTGTTTCAG CTTTCAGTGT TGTGCGTGGA GTATTTAGGT
GCTGTTTGGC CAATTTGGAC TGGCAAGGCG GTGGTATTAA AAACTCAGCC TGTGGATCCC
AGAAGTTTGT TTCGAGGTAA CTATGTGCGA CTTAATTATG ATATCAGCAG GGTTGAGCGT
AAAGATGCCG AAGCCTTTAA ATTAGGCAGT GTGGTTTATC TTACTCTTGA GGAGAACTCT
GGCTTGTGGC AAGCCAAAGA GGTAACACGT GATATGCCTA GTGAAGGGGA TTTTATTCGC
GGCCGTGTTC GGAGTCACTA TGGTGAAGTG CTCAGCATCG ATTACGGCAT TGAAGCTTTC
TTTATGCCAA AAGAGAAAGC GTTGGCGGTA GAAAAAGAGA TGCAAGGTAC GGGTACTGCC
CAAGTCGAGG TCTTTATCTC TGGATCTGGT AAAGCTAGAG CTGTAGGTTT TATATGTATT
GCAAAATCAT GTGATGAGTA TCCCGATGAT TGA
|
|---|
| Protein sequence | MESLVTPLLR KGSPSKRFVQ IGLFLTILFQ LSVLCVEYLG AVWPIWTGKA VVLKTQPVDP
RSLFRGNYVR LNYDISRVER KDAEAFKLGS VVYLTLEENS GLWQAKEVTR DMPSEGDFIR
GRVRSHYGEV LSIDYGIEAF FMPKEKALAV EKEMQGTGTA QVEVFISGSG KARAVGFICI
AKSCDEYPDD
|
|---|
| |