Gene Swoo_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2221 
Symbol 
ID6116491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2725884 
End bp2727344 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content43% 
IMG OID641633728 
Producthypothetical protein 
Protein accessionYP_001760597 
Protein GI170726571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0500323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0019612 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAAAAA AGCGCAGCTC AATACAAGAG AGTTCTACCC AAAAGAGCTC AACACAAAGA 
AGTTCAGCAT TTGAACTCGC CTCAGGGGCA TCAGATAAAC ACCAGTGCAA GCGCTATAGA
AATATCAATA AAAGCCTGAC TATAGCCAGC TTTGCGTTAT TTTCAGCGCC TGTTATGGCT
ACAGAGATAG ATGACTCTAA AGATATGGAG GAGGCTGATA AAACCAGTAT TAGTCTCCCC
ACGATAGCGA GCGAAAAGAA ACTTGAAGTA ACAAAAATAG AAACAGCGCT GCTCTATTAT
CAAGAACCTG ATAGGGTAAC AGCTGCAGAA GGCATTTTTA ATCTTCAAGC CAGTTATGGA
GATAAGAGTG AACTTGAGGG AAAACTCCTC CTCGATACCT TAACTGGTGC ATCTCCCAAC
GGCGCAGCTC CTCAACAGCA ACAACAAACC TTTACGCGAC CCTCTGGCAA CGGTGTTTAT
TATGCCAAAA ATGGTGAAAC ACCTCTGGAT GATACCTTTA AAGATACCCG TTTACAGCTA
AATGGTAACT GGACTGAAAC CCTCTCTAAT ACCGATAAAG TTAATCTTGG ATTTCATCTA
TCTCGTGAGT ATGACTATAC CTCCCTTGGG GTGAACAGTG GCGCCGAGCG GTCATTTAAC
AGGGGAAATA GCGCTGTGAA TCTTGCATTT GGCTATTACT ACGACATCAT AGATCCTGTT
GGGGGAAGGC CTGTTTCTTG GGCGCCTATG TTATTTAGAG ATGATTTTTC ATCTCAGTCA
GAGTTTAAGC AAGCATTTGA CAAAACAAGG GATCTATCGA GCTCCATTAA GCAAACTTTT
GATTTAAGTG TTGGTTTTAC GCAACTTCTG AATCGATACT GGCTAGTCCA AGGCAATTAT
AGTTTTTCCT ATCTTGATGG GTACATGACC GACCCCTACA AAATAATTAG CCAGATTGAT
GAACGGGGGA CGGCTCAGGG CTACCTCTAT GAGAATAGGC CAGATACACG ATATAAACAG
AGTGTATTCT TGTTAACCAA AGGCGCACTA GAAACTGGAG TTGTTGACCT CTCCTACCGA
TACAGTGCAG ATGACTGGGG CATAGATTCC CATACGGTTG AAACACACTA TCGTTATCAA
TTTACTGCTT CACTCTATGG TCAGATCCAT CTACGTTATT ATCGACAATC AGCGGTCGAC
TTTTATCATG CCTTCTTGCC AGAACTGGAT GAATTGCCAG AATACGGCAG TGCAGATAGC
AGGTTAGGGA AATTAACAGC CTATACATTT GGCATTAAAT TTGGTCATAA ACTCCAGGGG
GGAACAAAGT TTTCTTATCG GTTAGAGCTT TATCAGCATA GACCCCAGGA TAATGGTGAT
GAGCGAGTGG GTCAGCTCGC TCATTTAGGT TTATATGAGC AGGTTAATGC CGTTATTGCT
CAGATTGGTT TCGCATTTTA A
 
Protein sequence
MRKKRSSIQE SSTQKSSTQR SSAFELASGA SDKHQCKRYR NINKSLTIAS FALFSAPVMA 
TEIDDSKDME EADKTSISLP TIASEKKLEV TKIETALLYY QEPDRVTAAE GIFNLQASYG
DKSELEGKLL LDTLTGASPN GAAPQQQQQT FTRPSGNGVY YAKNGETPLD DTFKDTRLQL
NGNWTETLSN TDKVNLGFHL SREYDYTSLG VNSGAERSFN RGNSAVNLAF GYYYDIIDPV
GGRPVSWAPM LFRDDFSSQS EFKQAFDKTR DLSSSIKQTF DLSVGFTQLL NRYWLVQGNY
SFSYLDGYMT DPYKIISQID ERGTAQGYLY ENRPDTRYKQ SVFLLTKGAL ETGVVDLSYR
YSADDWGIDS HTVETHYRYQ FTASLYGQIH LRYYRQSAVD FYHAFLPELD ELPEYGSADS
RLGKLTAYTF GIKFGHKLQG GTKFSYRLEL YQHRPQDNGD ERVGQLAHLG LYEQVNAVIA
QIGFAF