| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2212 |
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| Symbol | |
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| ID | 6116482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2715145 |
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| End bp | 2716359 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633720 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_001760589 |
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| Protein GI | 170726563 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.369517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00133347 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTAACT CTCCGCTTTC CCCTAGCTCA ACAGAATTAG TTATCAGTAT TTTAGATATG
GTGTTATCTG AAGGTAAACC TTTAGATAGA GCTTATTCTG TTCACTTCTC TGGTCTTCAA
CTTATACCGT CGGAGCAGGC CCGTATAACT AAGGTCGTCG GAGATATTTT ACGTCGTTTG
AATCTGTACT GTTTTCTATC TGACGTGAAG CCTGAGGAGA TCTCTCGTTT GGGATCGCGT
TTGATGAATG CTTGGCACCT GTTTCACGAG CTTGAATTAC CAAAACTTCA ATACTCCTTG
CCTCTTGCTG AAGCTGAATA TTTTGCCCGT CTTGAAGAAG CTAAGCTTCA ACCAGCGCTC
TGGGATGGTT GTCCTGAATG GTTAGATACC ATGGGACAAG CTCAATTAGG AGAGGCATGG
GCAAAAGAGC GTGCGGCATT GAATACTCAG CCTAAGCGTT TTATTCGTAC CAATATTTTA
AAATGTACCC GTGAAGAGCT TGCAAAGAAG TTGCGCAATG AGCAAGTGCA AACAACTGAG
GTTGATGGTG TCGATACCGC CTTAGAGGTG GTGTCTGATT CTGCACTATT TCGTACAGAG
AGTTTCAAAA AAGGTTGGTT TGAGCAGCAA GACGCTGGCT CTCAGTTGGT GGCAGCAGCG
GTCGATGCCA AACCTGGTAT GCGCGTGATT GACGCATGTG CTGGTGCGGG TGGAAAAACC
CTTTCAATTG CAGCTCAGAT GAAAGGGAAA GGTCGTTTAC TGGCGATGGA TGTTGAGCAG
TGGAAACTCG ATAATCTTAA ACAGCGTGCT CGCCGTGCAA ATGCTAGTAA TGTTGAAACT
CGTATTATCG CCAGCAGCAA AACAATAAAG CGTTTGAAAT TGAGCGCCGA TAGATTGTTA
CTTGATGTTC CTTGTTCAGG TTTAGGCGTT CTTAAGCGTA ACCCTGATGC TAAATGGCGT
GACACGCCAG ATCGTCTCCC TGTTTTGGTT GAGCTGCAAA AGCATATTTT ACAAAGTTAT
AGTCGTATGG TGAAAGTGGG CGGGATCTTA ATCTATGCGA CCTGCTCAAT TATGCCAGAG
GAAAACCGCG ACCAAGTCGA CGCGTTTTTG GCTGAAAATG AACACTTTAC ATTTTTAGAA
GATGAAACCA TCAGTGTCGC TGACTCAGGT TTTGATGGCT TTTATATGGC AAGGCTTGAG
CGGATTGCTG AGTAG
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| Protein sequence | MLNSPLSPSS TELVISILDM VLSEGKPLDR AYSVHFSGLQ LIPSEQARIT KVVGDILRRL
NLYCFLSDVK PEEISRLGSR LMNAWHLFHE LELPKLQYSL PLAEAEYFAR LEEAKLQPAL
WDGCPEWLDT MGQAQLGEAW AKERAALNTQ PKRFIRTNIL KCTREELAKK LRNEQVQTTE
VDGVDTALEV VSDSALFRTE SFKKGWFEQQ DAGSQLVAAA VDAKPGMRVI DACAGAGGKT
LSIAAQMKGK GRLLAMDVEQ WKLDNLKQRA RRANASNVET RIIASSKTIK RLKLSADRLL
LDVPCSGLGV LKRNPDAKWR DTPDRLPVLV ELQKHILQSY SRMVKVGGIL IYATCSIMPE
ENRDQVDAFL AENEHFTFLE DETISVADSG FDGFYMARLE RIAE
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