| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2211 |
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| Symbol | |
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| ID | 6116481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2713709 |
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| End bp | 2714983 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633719 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_001760588 |
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| Protein GI | 170726562 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.17788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00147708 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTCAC TCTATAACAA CTCACAACTT GATAACTCTG GCTCCAATAA AGCAGGTACT
GAAGGGAGTT ATCGGTTTGC TTTGGTGTCT CTAACGTCTC TGTTTTTTAT GTGGGGCTTT
ATTACCTGCT TAAACGATAT CCTTATTCCT CATCTTAAGG CCGTCTTTTC CCTAAATTAT
ACCCAGGCGA TGTTAATCCA GTTTTGTTTC TTTGGCGCTT ATTTTTTAGT GTCTATTCCA
GCAGGCCGAT TAGTTAAAAA GCTTGGGTAT CAGAAGGGGA TAGTCACTGG GTTGATTATT
GCTAGTTTAG GTTGCGCCCT GTTTTACCCC GCAGCTGAGT TTGAAACCTA TGGCTTATTC
CTCGGCGCTC TATTTGTGTT AGCGTCTGGA ATTACAATAC TGCAGGTGGC TGCTAACCCC
TATGTCAATG CGTTAGGTAG TAGTGAGACG GCATCTAGCC GTTTAAATTT AACCCAAGCG
TTTAATGCAT TGGGGACGAC AGTGGCTCCC TATTTCGGGG CTGTGCTTAT TTTATCGGTA
GCCACGGAAG CCACATCGGC TTTAGCGCAC TCAGCAGAAG CTGAGGTAGT TAAGCTCCCT
TATCTTTTGT TATCAGGCAT GTTGGCCGTG CTAGCTTTGG TATTTGCCAA GCTTAAGCTA
CCTGTTATTC AATCTCATAT CGATTTAAAT AGCGGTGAAA CAGTCACGTA CAAAGGGAGA
ACAGGTGCGC TGCAATCGAC ACACTTGGTA TTAGGTGCAG TGGGTATTTT TGTTTATGTG
GGCGCAGAGG TGTCGATTGG CAGTTTTCTG GTTAACTTCC TAGGCGAGTC TCATATTGGT
GGATTGAAAG AGTCTGAAGC AGCCCAGCTT ATTACATACT ATTGGGGCGG GGCGATGGTA
GGGCGCTTTA TTGGTTCTGC GGTGATGCAA AAAGTGGCAG CGGGAAAAGT ATTGGCCTTT
AATGCGGCTA TGGCAGCTAT TTTGGTTGCT GTGGCCATGC TCAGTAGCGG TAACATTGCG
ATGTGGGCAA TCTTGGCTGT GGGTTTATTT AACTCAATTA TGTTTCCTAC TATCTTTAGC
TTGGCATTGA GGGATCTAGG ACCACATACA TCACAAGGCT CAGGAGTTCT CTGTTTGGCT
ATTGTTGGTG GAGCAATCTT GCCATTACTG CAGGGGATAA CGGCTGATGC TATCGGGATC
CAGCAGGCCT TTTTCCTACC TATCCTCTGT TATGCTTTCA TCCTATTTTA TGGTGTTAAA
GGTTCTCGTA TTTAG
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| Protein sequence | MASLYNNSQL DNSGSNKAGT EGSYRFALVS LTSLFFMWGF ITCLNDILIP HLKAVFSLNY
TQAMLIQFCF FGAYFLVSIP AGRLVKKLGY QKGIVTGLII ASLGCALFYP AAEFETYGLF
LGALFVLASG ITILQVAANP YVNALGSSET ASSRLNLTQA FNALGTTVAP YFGAVLILSV
ATEATSALAH SAEAEVVKLP YLLLSGMLAV LALVFAKLKL PVIQSHIDLN SGETVTYKGR
TGALQSTHLV LGAVGIFVYV GAEVSIGSFL VNFLGESHIG GLKESEAAQL ITYYWGGAMV
GRFIGSAVMQ KVAAGKVLAF NAAMAAILVA VAMLSSGNIA MWAILAVGLF NSIMFPTIFS
LALRDLGPHT SQGSGVLCLA IVGGAILPLL QGITADAIGI QQAFFLPILC YAFILFYGVK
GSRI
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