| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2205 |
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| Symbol | |
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| ID | 6116475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2701839 |
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| End bp | 2703188 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633713 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001760582 |
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| Protein GI | 170726556 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000325199 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCATTTT CCAAACTTGG ATTAAGTGAA CCTATTTTAA ATGCCGTAAC TGAATTGGGT
TACACCACAC CGACGCCCAT TCAGGCTGAG GCGATCCCGC TAGCCCTTAA AGGTAAAAAT
CTAATTGCAG CAGCACAAAC TGGTAGCGGG AAAACCGCTT CTTTTGTGTT ACCTATTCTT
GAGCTGTTAT CTGCTGGCGA GACTCAACGT AAAAAACGTG CCCGTGCTCT GGTTTTAACG
CCAACAAGAG AGTTGGCAGT TCAAGTGTGT AAGAGTATTG AGCTTTACGG CAAGCATCTA
AATCTTAACG CTATAGCCAT CTATGGTGGC GTCGATTATG CGCCACAAAA ACAGGCGTTA
ATTGATGGTG TCGATATTGT TGTGGCAACG CCGGGACGTT TGCGAGACCT CTATACTCAA
CGTGCAATTC ATTTCGATGA GACAACACTG CTCGTGCTTG ATGAAGCCGA TAGGATGTTG
GATATGGGGT TTATCGAAGA TATCACTAAG ATTATCGATA CATTGCCCGA GCAGAGGCAG
AGTTTGTTAT TTTCAGCAAC ACTCTCCAGA CAGGTGAGGG AGCTTGCTAA AGAGACTGTT
TGCGATGCTA TTCAACTCTC ATTTAATAAA GAGAATGAGG CTAAGCCAAA TATCGAACAG
TGGATCACCA CAGTCGATAA AGATAAGAAA TCAGCACTGC TCAGTCATTT AATTAATGAA
CAAAACTGGC CACAGGCACT GATCTTTATT GAAACTAAAC ATGGTGCAGC CAAATTGGTG
AGTCAGCTTG AAAAGCGTGG CATCGAAGCT GAGTGTATTC ATAGTGGGCG TACACAGGCC
ATTCGTGAGC AGATCTTGGC AGATTTTAAA TCTGGCAAGA TAAGGTATCT GATCTCCACT
GGGATCTCAG CTCGTGGTAT CGATATCGAT GAGTTACCTT TGGTGATTAA CTACGATTTA
CCCTTTCCAG CCGATGAGTA TGTTCATCGC ATTGGGCGTA CGGGCCGTGC AGGTTCAGCT
GGTGAAGCGA TCTCTTTGGT CTCAAAAGAT GACTTTAAAA ATCTGTGCAT GATTGAGAGC
CGATTAAACC ATCTGCTTGA ACGCCGTGTT ATAGAGGGGT TTTCACCGAG AAAAGAGGTG
CCCGTTTCGG TATTAAACTA TGTGCCTAAA TCACAACGTG ATGAAGATGG AAAGCGGATT
AAATCTGAGA AAAGTGCTAA ATCAGGGGCT GTTAGATCAA AAGCGAAAAG CAGTAAACCA
TCGAACCGCT TAGGAGATGG AAAAAGTACT GAGTCTTCAA AAAGTAACAC TCAAGCAGGC
TTTAATCCTT GGACAGACGG TAAGAGATAG
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| Protein sequence | MPFSKLGLSE PILNAVTELG YTTPTPIQAE AIPLALKGKN LIAAAQTGSG KTASFVLPIL
ELLSAGETQR KKRARALVLT PTRELAVQVC KSIELYGKHL NLNAIAIYGG VDYAPQKQAL
IDGVDIVVAT PGRLRDLYTQ RAIHFDETTL LVLDEADRML DMGFIEDITK IIDTLPEQRQ
SLLFSATLSR QVRELAKETV CDAIQLSFNK ENEAKPNIEQ WITTVDKDKK SALLSHLINE
QNWPQALIFI ETKHGAAKLV SQLEKRGIEA ECIHSGRTQA IREQILADFK SGKIRYLIST
GISARGIDID ELPLVINYDL PFPADEYVHR IGRTGRAGSA GEAISLVSKD DFKNLCMIES
RLNHLLERRV IEGFSPRKEV PVSVLNYVPK SQRDEDGKRI KSEKSAKSGA VRSKAKSSKP
SNRLGDGKST ESSKSNTQAG FNPWTDGKR
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