| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2201 |
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| Symbol | |
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| ID | 6116471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2695506 |
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| End bp | 2698028 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633709 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_001760578 |
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| Protein GI | 170726552 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.402848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000736169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATTTTCA GACCGAGCAA CCTACCAGTC CAATTTAGCA AAACGATACT CACCATCGCT
GTCACAGGGT TTCTATCAGC CTGCTCACCA TCATCAACAC AAACCGAACC AGCTAAGCCA
ATTGCGAGCA ACATAGCCAC TGGAGCCCCA GGTAACGAGC CTACTTGGGC TTTTGCGGGT
AAAACGGGGA TCGGCACCTC TTATCAAGCT TATGATAAAG AGGAACTTGA AAAGAGCCCC
AATAGCCGAG TCTGGTTTTC CATTGCACAA GGTGTGTTAA CAGAAACCAT GTATGGATTG
ATCCACAATG CTCAGCTTAA AGAGATGCAG TTCATCATCA CAGGCGAAGG TTTTGTCGAT
ACAGAAAAAG ATAACACCAC CAGCACAATA GATTATCTGC ATAAAGACAA AATGGGACGC
CCTCTCTCTT TGGCTTATAA AGTAGTTAAT AGAGATATTG AAGGTAAATA TGAAATAGAG
AAGCATATTT TTACCGACCC TAAGCGTGAT AGTTTAATGA TGCGGGTCAT TTTTACCGCT
TTTGAAGATG GCATTACTCC CTATGTGTAT CTCAACCCTC ACATTGACAA TAGTGGCGCT
AATGACATTG CTAAGGTGAT TAATGAACCA AATAAACAAC AACTTCAAGC ATACACTGGA
GCGAGTCAAT CTAGTGTGTT GACCTTAAGA TCGGATCTTG TTTTCACCAA AGCCAGCGCA
GGCTTTGTTG GCAGATCAGA TGGGCTTACA GATCTTAAAC AAGACGGTAA GATGGATTGG
CAGTTTACCT CTACCAGCGA AGAGAAAAAC CACAATAAAC AGCCATCTCA GAACTTAGGC
AATGTGGCAT TGACAGCTCA ACTTCCAACA CCACAAAGAA GCACAGATGA AAAGGACAGC
AGTCTTGATT TCAATCTTGT CCTTGGTTTT GGTCAAAGTA AAACAGAGAG TCTAGCCAAT
GCTGATGCAA CATTAGCAGA CGGTAATAAT ACTGTACTCG ATACATACAA TGGCAAGGGA
GATGCCCTAG GTTGGCAAGA TTATCTAGCT TCTCTAACCC AGCTTTCGCC AATGTCAGCC
AATACCACAG ACAATGGCAA ACTGCTGTAC GCCAGTGCAC TTGTTCTCAA GGCTCAAGAG
GACAAAACTC ACCCTGGCGC CCTTATCGCT TCTCTGTCCA ACCCTTGGGG AGACACAATA
CCAGCAACGA AAGCCAGCAC AGGTTATAAA GCCGTCTGGC CCAGAGATTT CTATCAGTGC
GCTATGGCAT TTCTGGCCAT GGGCGATACA CAAACCGCTA AAGTTGCCTT TGAATATCTA
AAGAAAGTAC AAGCCACCAA AGACACCCCA GGTTTTAGTG GAACTCCAGG TTGGTTCTTA
CAAAAAACCC AGGTTGACGG TGAAATAGAG TGGGTCGCCG TTCAACTGGA TCAAACTGCC
ATGCCCATCA TGTTAGCTTG GAAACTGTGG CAAGCAGGTG TACTTACCGA CAGTGATATC
GCTCATTGGT ACGCCCAGAT GCTAAAACCA GCTGCTGAGT TTTTAGTCAC TGGTGGCGAA
GTTAATTTAG GCTGGAACCA CTCAGAGATC ACACCGCTCA AAACACAACA AGAGCGCTGG
GAGGAGCAGA TTGGTTACTC TCCCTCTACC TCAGCCGCCG TAATTTCTGG CTTAATTGCA
GCCAGTGAAA TAGCCAAAGT AGCAGACGAT AACCAAGGTG CAGAGCGTTA TTTAATCACA
GCGAAAACCA TGAATAACAA GCTCAGCAAG CTCCTTATCA CAGATAATGG TTTGCTCAGT
GCCACCTCGC CAGTCCCCTT GACAGGCAAG CAGGCTCCCG CCCCTTACTA CCTTAGGCTG
GCTCCAAATG GCACCCCCAA CACAGATGAC CGTCTGGGTG ATAACAATGG GCGTCCAGGG
CTAGATCAGC GACTCGTACT CGACGGTGGT TTCTTAGAAC TCGTTCGTTA CGGCGTTCGT
CCAGCACAAG ATCCTGTGAT CGAACAAACA CTTGCTTTAA TCGATAACAC CCAACTAGAG
GATCAACTCA GAGTTAAATA TCTGTTTACC GCTAAAGATG GCACCCAATT TCCAGGCTTT
AGACGTTACG GTAATGATGG TTATGGTGAA GATACTCAAA CTGGAGACAA CTACGCCGAA
AAAGGCAGTA ATAGCCTAGG GCAACGTGGT CGAGTTTGGC CATTCTTTAC TGGTGAACGT
GGGCATTATG AACTAGCTAA AGCCATCCAA TCAGATCAGT TAACGAAAGA GAAACAAAGC
GAGCTGATTA ATACCTATGT TCAGGGAATG GAAGCATTCG CAAATGATGG ATTGATGCTA
CCAGAGCAAG CTTGGGACGG CGTAGGTCAT GCCACTCGAT ACCAGTATCA ACTTGGGCAG
GGAACAAACT CTGCCACCCC ACTGGCGTGG ACACATGCCG AATACATCAA GTTAGTCCGC
TCAATGACAG ATAAGCAGGT ATGGGATCAC TATGAGCTTG TCTCAAAAAC ATTAAATGAA
TAG
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| Protein sequence | MIFRPSNLPV QFSKTILTIA VTGFLSACSP SSTQTEPAKP IASNIATGAP GNEPTWAFAG
KTGIGTSYQA YDKEELEKSP NSRVWFSIAQ GVLTETMYGL IHNAQLKEMQ FIITGEGFVD
TEKDNTTSTI DYLHKDKMGR PLSLAYKVVN RDIEGKYEIE KHIFTDPKRD SLMMRVIFTA
FEDGITPYVY LNPHIDNSGA NDIAKVINEP NKQQLQAYTG ASQSSVLTLR SDLVFTKASA
GFVGRSDGLT DLKQDGKMDW QFTSTSEEKN HNKQPSQNLG NVALTAQLPT PQRSTDEKDS
SLDFNLVLGF GQSKTESLAN ADATLADGNN TVLDTYNGKG DALGWQDYLA SLTQLSPMSA
NTTDNGKLLY ASALVLKAQE DKTHPGALIA SLSNPWGDTI PATKASTGYK AVWPRDFYQC
AMAFLAMGDT QTAKVAFEYL KKVQATKDTP GFSGTPGWFL QKTQVDGEIE WVAVQLDQTA
MPIMLAWKLW QAGVLTDSDI AHWYAQMLKP AAEFLVTGGE VNLGWNHSEI TPLKTQQERW
EEQIGYSPST SAAVISGLIA ASEIAKVADD NQGAERYLIT AKTMNNKLSK LLITDNGLLS
ATSPVPLTGK QAPAPYYLRL APNGTPNTDD RLGDNNGRPG LDQRLVLDGG FLELVRYGVR
PAQDPVIEQT LALIDNTQLE DQLRVKYLFT AKDGTQFPGF RRYGNDGYGE DTQTGDNYAE
KGSNSLGQRG RVWPFFTGER GHYELAKAIQ SDQLTKEKQS ELINTYVQGM EAFANDGLML
PEQAWDGVGH ATRYQYQLGQ GTNSATPLAW THAEYIKLVR SMTDKQVWDH YELVSKTLNE
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