Gene Swoo_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2193 
Symbol 
ID6116463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2686229 
End bp2686615 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content44% 
IMG OID641633701 
Producthypothetical protein 
Protein accessionYP_001760570 
Protein GI170726544 
COG category[S] Function unknown 
COG ID[COG3603] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00118901 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAAGAA TGACTCTTGC CGTTCATTCT CAACTTTATA GCATTCACAG CTTTAGCCCT 
GATGCTAAGA TCCCCCCTGC CATATTTACT CAAGAGATGT TTTTTGTCGG TAAGACCAAA
GATGAACTCT CTGTTGTGGT CCCGGCGGAG CTCAAGCTTG AAAGCCTCGA AGAGGAGAGT
AACTGGCGCT GCTTAGAAGT TGTCGGTCCC CTTGGATTCT CAATGACAGG TATCCTATCG
AGTGTGTCAG GTGCATTAGC AGGAGCTGGG ATCAGCATTT TTGCTATCTC AACCTTCGAC
ACTGATTATA TCCTCGTCAA AAAAGACAAG CTTAATGAAG CTGTCAGTGC ACTAAAAAAG
AAGCAATTTC AGATCACCGA ATATTGA
 
Protein sequence
MSRMTLAVHS QLYSIHSFSP DAKIPPAIFT QEMFFVGKTK DELSVVVPAE LKLESLEEES 
NWRCLEVVGP LGFSMTGILS SVSGALAGAG ISIFAISTFD TDYILVKKDK LNEAVSALKK
KQFQITEY