Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2190 |
Symbol | |
ID | 6116460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2683602 |
End bp | 2684111 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641633698 |
Product | PTS system glucose-specific transporter subunit |
Protein accession | YP_001760567 |
Protein GI | 170726541 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2190] Phosphotransferase system IIA components |
TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00862742 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGATTTT TAAGCCGAAT AAGACGTTTA ATGTCAGGAC AAGCCAATCC CGTTGGTGGT ATTGAAATTT ATGCCCCTGT GTCAGGTGAG ATCTTAGCGA TTGAAAAGGT ACCTGATGTC GTTTTTGCCG AAAAAATAGT CGGGGACGGT ATCGCGATTA ACCCGAAAGG TAGTCAGATT TTTGCTCCAA TAGATGGCAC TATCGGAAAA ATATTTGAAA CTAACCATGC GTTTAGCATC GAATCTCACC AAGGGTTAGA GCTCTTTGTC CACTTTGGTG TCGGCACAGT AGAGCTTAGA GGTAATGGTT TTAATCGACT TGCTGAAGAG GGCCAAGTGG TCAAAAAAGG TGATCCTATT CTCGAGTTTG ACCTCAGCTA CCTTAAAGAA CATGCAGAGA GCCTACTGAC CCCTGTAGTA CTGGCCAACA TGGAAGATGT GAGATCGCTA AATAAATCTC ACGGTCATGT TGAGGCAGGC AAAGATGTGA TTTTTACCGT CGATCTTTAA
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Protein sequence | MGFLSRIRRL MSGQANPVGG IEIYAPVSGE ILAIEKVPDV VFAEKIVGDG IAINPKGSQI FAPIDGTIGK IFETNHAFSI ESHQGLELFV HFGVGTVELR GNGFNRLAEE GQVVKKGDPI LEFDLSYLKE HAESLLTPVV LANMEDVRSL NKSHGHVEAG KDVIFTVDL
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