Gene Swoo_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2190 
Symbol 
ID6116460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2683602 
End bp2684111 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content43% 
IMG OID641633698 
ProductPTS system glucose-specific transporter subunit 
Protein accessionYP_001760567 
Protein GI170726541 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2190] Phosphotransferase system IIA components 
TIGRFAM ID[TIGR00830] PTS system, glucose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00862742 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGATTTT TAAGCCGAAT AAGACGTTTA ATGTCAGGAC AAGCCAATCC CGTTGGTGGT 
ATTGAAATTT ATGCCCCTGT GTCAGGTGAG ATCTTAGCGA TTGAAAAGGT ACCTGATGTC
GTTTTTGCCG AAAAAATAGT CGGGGACGGT ATCGCGATTA ACCCGAAAGG TAGTCAGATT
TTTGCTCCAA TAGATGGCAC TATCGGAAAA ATATTTGAAA CTAACCATGC GTTTAGCATC
GAATCTCACC AAGGGTTAGA GCTCTTTGTC CACTTTGGTG TCGGCACAGT AGAGCTTAGA
GGTAATGGTT TTAATCGACT TGCTGAAGAG GGCCAAGTGG TCAAAAAAGG TGATCCTATT
CTCGAGTTTG ACCTCAGCTA CCTTAAAGAA CATGCAGAGA GCCTACTGAC CCCTGTAGTA
CTGGCCAACA TGGAAGATGT GAGATCGCTA AATAAATCTC ACGGTCATGT TGAGGCAGGC
AAAGATGTGA TTTTTACCGT CGATCTTTAA
 
Protein sequence
MGFLSRIRRL MSGQANPVGG IEIYAPVSGE ILAIEKVPDV VFAEKIVGDG IAINPKGSQI 
FAPIDGTIGK IFETNHAFSI ESHQGLELFV HFGVGTVELR GNGFNRLAEE GQVVKKGDPI
LEFDLSYLKE HAESLLTPVV LANMEDVRSL NKSHGHVEAG KDVIFTVDL