| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2187 |
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| Symbol | |
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| ID | 6116457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2681253 |
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| End bp | 2681945 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633695 |
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| Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
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| Protein accession | YP_001760564 |
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| Protein GI | 170726538 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.222762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0101242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCTAATCT CACCAGATGC CCTCTACGGC CTTGATAGCG AGCACCTTGT GGACTATCAA
GGTCATAGGC TCGAGCCAAA AACGGCTCAA GCCTTGGCAA GTATGACTAT AGCTGCAAAA
CATCAAGGCA TCGATATTGC TGTCTGTTCA GGCCATAGGC ATTTTAACAA GCAGCTGCAG
ATCTGGAACG CAAAAGCCCA AGGAAAACGT ACACTGCTAG ATATTGACTC TCACCCCGTC
TCGATAGCGA ATAAAAGCCA ACAAGAGATA GTTGAATTGA TACTCTTATG GTCTGCACTA
CCGGGCACAT CGAGACACCA TTGGGGTACG GATGTAGATC TCTATGACGC CAGTGCTATC
ACTAGCGGTG AGTTACGACT TGTCTCCTGC GAGTATGAAG ACAACGGCCC CTGCGCACCT
CTGCACCGTT GGCTGGTCAA GCACAGTCAT GAATTTGGCT TCTATTTTCC ATTTCAGGCG
GGTCTTAGTG GGGTCAGCCC AGAGCCTTGG CACTTAAGCT ATTTTCCCGT AGCCAATGAG
CTACTCAAAG GCTTTGATAC CGGTAGAATC AATGCCATTT TAAACGATGC CGATATTGAG
CTAAAGAGTG CCATAATCCC TAAACTCACC CATATTATTA ATGAATATGT ACAAAGAGTG
GCGCCAGCTC CTTCAGCAAC AAACACTTTT TAA
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| Protein sequence | MLISPDALYG LDSEHLVDYQ GHRLEPKTAQ ALASMTIAAK HQGIDIAVCS GHRHFNKQLQ
IWNAKAQGKR TLLDIDSHPV SIANKSQQEI VELILLWSAL PGTSRHHWGT DVDLYDASAI
TSGELRLVSC EYEDNGPCAP LHRWLVKHSH EFGFYFPFQA GLSGVSPEPW HLSYFPVANE
LLKGFDTGRI NAILNDADIE LKSAIIPKLT HIINEYVQRV APAPSATNTF
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