Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2184 |
Symbol | |
ID | 6116454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2678204 |
End bp | 2679388 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641633692 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_001760561 |
Protein GI | 170726535 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000281032 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0116098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGTT TTGAATTATT TGGTCCTGAA GAGAAGCAAG AAGTTGCAGA TGTAATGGAG AACGGTTTTA CTTTCCGTTA TAACTTCGAT CATATGCGCA ATGACCGTTG GAAGACACGT GAGATGGAGC AGCTACTTTG TGAAAAGATG GGCGTAAAAC ATGCTCACCT GCTCTCTAGT GGTACTGCGG CTCTTCAAAC GGCACTTGCG GCTGCAGGCA TTGGCGCTGG TGATGAAGTT ATTGTCCCAC CATTTACCTT TGTTGCATCT GTTGAAGCCG TATTTATGGC TGGCGCAGTC CCTATTTTTG CAGAGATTGA TGAAACTCTA TGTTTGTCTC CTGAGGGCAT TGAAGCTGCC ATCACACCAC GCACTAAAGC GGTTAACTTA GTTCATATGT GTGGTTCAAT GGGCAAGTTA GATGAGATTA AAGCCATCTG TGAAAAGCAT GATCTAGTCC TACTTGAAGA TGCTTGTCAG GCTATTGGTG GTACTTACAA AGGTCAAGCC CTAGGCACTA TCGGTGATGT AGGCTGCTAC TCATTTGATT CAGTGAAAAC CATTACCTGT GGTGAGGGTG GCGCGGTGAT CACCAACAGC GAAACCATCT ACAAAAACTC ACACATGTTC TCAGACCACG GTCACGACCA TGTGGGTAAC GATCGTGGTG CAGAAGGCCA CCCTATTATG GGCTTGAACT TCCGTATCTC TGAGATGAAC TCGGCGATGG GTCTTGCTCA GCTACGTAAA CTCGATACCA TTATCGATAT CCAACGTAAA AACAAGAACA CCATCAAGTC AGCCATTGCA GATATCGCCG ATATCTCTTT CCGCGAACTA CCAGATGTTA AAGGTGACTC AGCAGGCTTC TTGACCTTTA TGATGCCAAC CGAAGAGCGC ACCATAGAGA TCAACAAAAA GTTAGCTGAA AATGGCGTAG ATGGCTGCTT CTACTGGTAC GTGAACAACT GGCACTACCT AAGTAACTGG AAGCATATTC AAGAGCTTAA GTCTTGCTCT GCCCTACCGA TCACATTAAT TGAAGATCGT CCTGATTATA CTCAAGTTTC AGTGCCTAAG TCTGATGCCA TCATGAGCCG TACTATCTCT ATGCTAATCA AACTGTCATG GACAGAAGAT GAGATCGCAC AGCGTATTGA AAACATCAAG CGTGCTTTCG CTTAA
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Protein sequence | MPGFELFGPE EKQEVADVME NGFTFRYNFD HMRNDRWKTR EMEQLLCEKM GVKHAHLLSS GTAALQTALA AAGIGAGDEV IVPPFTFVAS VEAVFMAGAV PIFAEIDETL CLSPEGIEAA ITPRTKAVNL VHMCGSMGKL DEIKAICEKH DLVLLEDACQ AIGGTYKGQA LGTIGDVGCY SFDSVKTITC GEGGAVITNS ETIYKNSHMF SDHGHDHVGN DRGAEGHPIM GLNFRISEMN SAMGLAQLRK LDTIIDIQRK NKNTIKSAIA DIADISFREL PDVKGDSAGF LTFMMPTEER TIEINKKLAE NGVDGCFYWY VNNWHYLSNW KHIQELKSCS ALPITLIEDR PDYTQVSVPK SDAIMSRTIS MLIKLSWTED EIAQRIENIK RAFA
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