| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2177 |
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| Symbol | |
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| ID | 6116447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2669458 |
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| End bp | 2670342 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633685 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001760554 |
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| Protein GI | 170726528 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000474227 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.485402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAACG GAAGCATCGT AGCCTTAATC ACACCAATGA ATAGTGATGG CTCAGTAGAT
TACAAAAGTC TTGAACAGTT AGTTGAGTAC CACGTTACTG AAGGTACAGA TGCCATCGTA
GCAGTAGGCA CCACAGGTGA GTCTGCAACT CTGCCAATTC CAGAGCATAT CGAAGTTGTG
TCACAAACGG TTAAGTTCGC TGCAGGTCGA TTACCTGTTA TTGGTGGTAA TGGCGGAAAC
GCGACTGCTG AGGCGATAGA GTTAACCAAA GCACAATCTA AACTTGGTGT CGCAGCCATG
TTAGGCGTTA CCCCCTATTA CAACAAACCT AGTCCTAAAG GGATCATCGC CCACTATAAA
GCAGTGGCTG CGAGTACTGA TGTCCCGCAA ATTCTTTACA ATGTTCCCGG ACGTACCGCA
GTGGATATGT TACCGGAAAC CATTGCTGAA CTCGTTGATG TACCAAATAT TATAGGTGTC
AAAGAGGCGA CGGGTGACTT AAGCCGCGTG AAACGTTTAC GTGAGCTATG TGGTAATGAT
TTTCTGCTTT ATAGTGGTGA TGATGCCACG GCCAGAGAGT TTTTAACCCT TGGTGGTGAT
GGTGTTATCT CGGTTGCCAA TAATATCGTA CCTAAGCAGT TTAAAGCGAT GTGTGATGCT
GCATTGTCGG GTAATTTAGC CGCTGCGCAG GGAGCAGAAG ATACCATTAA AGGGCTGTTC
TCAGCACTAT TTTGCGAGGC GAATCCGATC CCTGTTAAAT GGGCCGCTCA CCGTATGGGC
TTGATAACTC ACGGAGATAT TCGTCTACCT TTAACGGAAC TTTCTGATGA GTTCCATGGT
CTGTTATTAG ATGCAATGAA AAATGCCCGA ATAGAGGTTA ATTAA
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| Protein sequence | MINGSIVALI TPMNSDGSVD YKSLEQLVEY HVTEGTDAIV AVGTTGESAT LPIPEHIEVV
SQTVKFAAGR LPVIGGNGGN ATAEAIELTK AQSKLGVAAM LGVTPYYNKP SPKGIIAHYK
AVAASTDVPQ ILYNVPGRTA VDMLPETIAE LVDVPNIIGV KEATGDLSRV KRLRELCGND
FLLYSGDDAT AREFLTLGGD GVISVANNIV PKQFKAMCDA ALSGNLAAAQ GAEDTIKGLF
SALFCEANPI PVKWAAHRMG LITHGDIRLP LTELSDEFHG LLLDAMKNAR IEVN
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