Gene Swoo_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2175 
Symbol 
ID6116445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2668070 
End bp2668540 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content44% 
IMG OID641633683 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001760552 
Protein GI170726526 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0274567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAT TAACCTCAGG TGAGCTCGCC CCTATGTTCA CACTGAAAAA CCAGCAAGAT 
GAGTCAATCT CGTTGGAAGC TTGCCTAGCT CAAGGACCTG TACTGGTCTA TTTTTACCCC
AAAGCTTCTA CCCCTGGCTG TACTGTCCAA GCCTGTGGCT TAAGAGACAG CCGTGAAGAT
TTGTCTGAGC TTAACGTTAC TGTATTAGGT ATTAGCCCTG ACCCTGTGGC TAAACTCGCC
CGCTTCTCAG ATAAACAATC ACTCAACTTC TCCCTGCTCA GCGATGAAGA TCATGCCATC
GCCGATGCAT TTGGTGTTTG GGGAGAGAAG AAGTTTATGG GTAAAATTTA CGATGGGATC
CACAGATTAA GCTTCCTCAT CGGCCAAGAT GGTAAAGTCG CTCATGTATT TAATAAATTT
AAGACTAAAG ATCATCATGA GGTGGTATTA AAACATCTCA AAGAGGGCTA A
 
Protein sequence
MKTLTSGELA PMFTLKNQQD ESISLEACLA QGPVLVYFYP KASTPGCTVQ ACGLRDSRED 
LSELNVTVLG ISPDPVAKLA RFSDKQSLNF SLLSDEDHAI ADAFGVWGEK KFMGKIYDGI
HRLSFLIGQD GKVAHVFNKF KTKDHHEVVL KHLKEG