| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2174 |
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| Symbol | |
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| ID | 6116444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2667390 |
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| End bp | 2668001 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633682 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001760551 |
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| Protein GI | 170726525 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1279] Lysine efflux permease |
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| TIGRFAM ID | [TIGR00948] L-lysine exporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0221131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGCAT TTATTCAAGG TGTGGGAATA GGGGGAAGCT TAATCATGGC TGTTGGCGCA
CAAAATGCGT TTGTGTTGAA GCAGGGGTTA AAACGCTCTC ATTCGCTGCC AATTGCAGGT
TTATGCTCCT TAATCGATGC CTTGATGATC ACGGCAGGTG TTGCCGGATT AGGTCATTTG
ATTTTGGCCT TTCCACTTAT TAAAGATATA GCCAGTATCG GTGGAGCCAT ATTTTTGTTG
GTGTATGGGG CTAAAGCGCT GCAATCATCC TTTATCCCGC ACAGCCTAGG TGATGAAACA
AGTAAGGGGA CTGATACATT GAAGGCGGCG GTATTAACCA CCTTAGGGAT CAGCCTACTT
AACCCACATC TCTATTTGGA CACTGTGGTG CTTCTGGGCA GTATCAGTGC ACAGTTTGAG
GGCAGCGACC GTCCTATGTT TGGTGCTGGG GCTGTATTGG CATCTTTTGT ATGGTTCTTT
AGCTTAAGTT TTGGAGCTCG TTATTTAAGC CCACTGTTTC AAAAGCCTAA GGCTTGGTGT
TATCTCGATA GGTTTATCTG TGCGACCATG TGGACCATCG CTGGAGTGTT AATTTGGCCC
TACCTGTTTT AG
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| Protein sequence | MQAFIQGVGI GGSLIMAVGA QNAFVLKQGL KRSHSLPIAG LCSLIDALMI TAGVAGLGHL
ILAFPLIKDI ASIGGAIFLL VYGAKALQSS FIPHSLGDET SKGTDTLKAA VLTTLGISLL
NPHLYLDTVV LLGSISAQFE GSDRPMFGAG AVLASFVWFF SLSFGARYLS PLFQKPKAWC
YLDRFICATM WTIAGVLIWP YLF
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