| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2156 |
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| Symbol | |
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| ID | 6116426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2647657 |
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| End bp | 2649183 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633666 |
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| Product | SpoVR family protein |
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| Protein accession | YP_001760535 |
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| Protein GI | 170726509 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2719] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0915233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACA AGAAAAAAAG AACACCGCTA GACGATGGGC CAGATTGGAC CTTCGATCTT
CTTCAAACCT ACTTAACCGA AATTGAAAAA GTAGCGGCTC ATTACAAACT AGACTCCTAT
CCTAATCAAA TAGAGGTGAT AACCGCTGAA CAGATGATGG ATGCCTACGC AGGGATAGGT
ATGCCAATTG GCTATACCCA CTGGTCATTT GGTAAAAAGT TCATTGAAAC AGAGCAGAGC
TATAAGCGTG GTCAAATGGG CCTTGCTTAT GAAATAGTGA TTAATTCAGA TCCCTGTATC
GCCTATCTGA TGGAGGAGAA TACCATCACA ATGCAGGCAC TTGTGATGGC TCATGCCAGT
TTTGGCCATA ATAGCTTCTT TAAAAATAAC TATCTTTTCA AAACATGGAC AGATGCCAGC
TCCATCATTG ACTACCTTGT ATTCGCTAAA AAGTACATCA GTCAATGCGA AGAGGCTCAC
GGTGCTGAAA AGGTGGAGCT TATTATCGAC TCCTGTCACG CATTGATGAA TTACGGTGTG
GACAGGTACA AACGTCCCAG TGAGATCTCT TTTAAAGAGG AGCAACTAAG ACAGAAAGAC
CGTGAAGAGT ATCTACAAAG TCAAGTCAAC GACCTCTGGC GCACTATCCC TTTAAACCAA
AGTGATGCAA AAGAGAAACC CAGATCTCAT TTTCCCGAAG AGCCTCAGGA GAATATTCTC
TACTTTATTG AGAAGCACGC ACCACTGTTA AAACCTTGGG AGAGAGAGAT TGTTCGAATA
GTACGAAAGA TGGGGCAATA TTTCTATCCA CAAAAACAGA CTCAGGTGAT GAACGAAGGC
TGGGCAACCT TTTGGCACTA CACCATACTT AACCACCTTT ATGATGATGG TTTAGTCACA
GATCGTTTTA TGATGGAGTT TTTGCAGAAC CACACCAATG TGGTCGCACA GCCAAGCTAC
AATAGCCCCT ACTATAGCGG CATTAACCCC TATGCCTTAG GTTTTAATAT GTTTGTCGAT
ATCAGGCGAA TATGTGAGAA CCCTACAGAG GAGGACAAAC GTTGGTTCCC GGATATTGCA
GGCAGTGATT GGCTTGAAAC CCTGCATTTT GCTATGCAGA ACTTTAAAGA TGAGAGCTTT
ATCAGCCAAT ACCTATCACC AAATATTATT CGCCAATTTA AACTCTTTGG TGTACTAGAT
GATGATAAGA AAAACTACCT GTCTGTATCG GCTATTCATG ATGATCAAGG CTATAAAGAT
ATACGTCAAA TGCTATCGCA GCAGTATAAC CTGTCCAACT TAGAGCCTAA CATTCAAGTG
CAGAGTGTTG AAGTGAAAGG AGATAGGTCC CTAACCTTAA GGTATATTCC AACAAATCGC
GTACCTCTGG CAAAAAGCCG CCATGAAGTT GTAAAGCATC TGCATCGGCT CTGGGGCTTT
GACGTGAGGT TAGAGGAGTT AAATCTAGAC GGTGAGCGTA CAGTAATAGC CGCCTGCCCC
GATCAGGAAG ATGAAGAGGA ATCTTAA
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| Protein sequence | MDNKKKRTPL DDGPDWTFDL LQTYLTEIEK VAAHYKLDSY PNQIEVITAE QMMDAYAGIG
MPIGYTHWSF GKKFIETEQS YKRGQMGLAY EIVINSDPCI AYLMEENTIT MQALVMAHAS
FGHNSFFKNN YLFKTWTDAS SIIDYLVFAK KYISQCEEAH GAEKVELIID SCHALMNYGV
DRYKRPSEIS FKEEQLRQKD REEYLQSQVN DLWRTIPLNQ SDAKEKPRSH FPEEPQENIL
YFIEKHAPLL KPWEREIVRI VRKMGQYFYP QKQTQVMNEG WATFWHYTIL NHLYDDGLVT
DRFMMEFLQN HTNVVAQPSY NSPYYSGINP YALGFNMFVD IRRICENPTE EDKRWFPDIA
GSDWLETLHF AMQNFKDESF ISQYLSPNII RQFKLFGVLD DDKKNYLSVS AIHDDQGYKD
IRQMLSQQYN LSNLEPNIQV QSVEVKGDRS LTLRYIPTNR VPLAKSRHEV VKHLHRLWGF
DVRLEELNLD GERTVIAACP DQEDEEES
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