| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2141 |
|---|
| Symbol | |
|---|
| ID | 6116404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2626798 |
|---|
| End bp | 2627820 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641633644 |
|---|
| Product | dihydroorotate dehydrogenase 2 |
|---|
| Protein accession | YP_001760520 |
|---|
| Protein GI | 170726494 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTACA AACTCGCTCA GAAAGTCATG TTTCAGATGG ATCCTGAAAA GGCTCATCAC
TTTGCATTAA ACAGCTTAAT GGCAACGGCT AATACACCAT TAGATTGTTT CTATGCTCAG
AAGATTGCGC CAAGCCCAGT AGAGTTTATG GGAGTGACTT TTCCAAATCC TGTGGGATTA
GCTGCTGGCA TGGATAAAGA TGGTGAGTGC ATCGATGGTT TTCATGCTAT GGGTTTTGGT
CATATTGAAG TTGGCACAGT AACCCCGCGG CCGCAACCTG GTAATGATCT ACCACGTCTA
TTTCGTTTAA AGCCTGCAAA GGGCATTATC AATAGAATGG GTTTTAACAA TAAAGGGGTA
GATAACCTGA TAGCCAATCT AAAAGCGGCT AAATCAGGAG CCTTGATTGG TGTCAATATC
GGTAAAAATA AAGACACACC AGTTGAGCAA GGAAAAGATG ATTACCTTAT CTGTATGGAT
AAAGTGTATG AATATGCAGC TTATATTGCG GTTAACATCT CATCGCCAAA CACTCCAGGT
TTGCGCAGTC TGCAGTATGG GGATCTTTTA GATGATCTAT TAGGATCGCT AAAAGCCAAG
CAGAAAGATC TTGCACAGAA GCATGGAAAG TACGTACCTA TAGCATTAAA AATTGCACCG
GATCTCTCTG ATGAGGAGAT TCAAAAAATT GCTGACTCTC TAATAAAGAA CCAGTTTGAT
GGTGCAATTG CCACTAATAC AACATTAAGT CGTGACGGTG TGAGTGGACT GATGAATGCC
AATGAAACTG GCGGATTGAG CGGTAAACCT TTGAATTTGC TGTCTACATC AGTCATCAAA
AAACTGTCTA GCTGCTTAAA TGGTCAGATC CCGATTATTG GAGTCGGTGG AATTAACTCT
GCTGCTGATG CAATCGATAA ACTCGATGCT GGAGCAAGTA TGGTTCAGAT CTATTCAGGC
TTTATCTATC AGGGTCCTAA GTTAATTAAA GATATCATCG AAGCTTGTAG AGTTCGTAAA
TAA
|
|---|
| Protein sequence | MFYKLAQKVM FQMDPEKAHH FALNSLMATA NTPLDCFYAQ KIAPSPVEFM GVTFPNPVGL
AAGMDKDGEC IDGFHAMGFG HIEVGTVTPR PQPGNDLPRL FRLKPAKGII NRMGFNNKGV
DNLIANLKAA KSGALIGVNI GKNKDTPVEQ GKDDYLICMD KVYEYAAYIA VNISSPNTPG
LRSLQYGDLL DDLLGSLKAK QKDLAQKHGK YVPIALKIAP DLSDEEIQKI ADSLIKNQFD
GAIATNTTLS RDGVSGLMNA NETGGLSGKP LNLLSTSVIK KLSSCLNGQI PIIGVGGINS
AADAIDKLDA GASMVQIYSG FIYQGPKLIK DIIEACRVRK
|
|---|
| |