| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2140 |
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| Symbol | |
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| ID | 6116403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2621894 |
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| End bp | 2626738 |
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| Gene Length | 4845 bp |
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| Protein Length | 1614 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633643 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_001760519 |
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| Protein GI | 170726493 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.520621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.34702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGA AAGATGCAAT GCCTTCGGTA CTACTTGAAA ATGTAGTAAA CCTTATTCAC
TCTAAAGTTC CTAACGCACA AGCAAAACAG GTAGAACAAT TTGCCAATTG TCTCTACGCT
CACATGTCTA AAGATGATCT AAAAGCCCGA AATGACAGTG ATCTTTATGG GGCAGTGTTA
AGCTTGTGGA ATGCGGCAAA TCTCACTGAA AAAGGTGAGT CTCATATTCG GGTTTTCAAC
CCAAGTCAGT CTAAGCATGG CTGGCAATCT ACTCATTCAA TCATCGAAGT TATCCAACCT
GATATGCCTT TCTTGGTGGA CTCCATCAGC ATGGCATTAA ATCGTGTCGG GATCACATCC
CACATGATTT TGCACACCCC ACTCTCAATA AAAAGAACAA AAGGGAGTAT TTCTCAGGTT
AGGTATTGTG ATGATGCCGA TGATAAGTTT GAAAAAGTTG CGGTTTTTCT TATCGAAATT
GATAGGCAAA GCACCAATAA AGATATAAAA CAGCTAGAGA AAGAGATTGA GTCTGTATTG
GGCGATGTCG CGGCATCTGT GCATGACTGG AAAGCGATGT CTGGTAAGTT AAGCTCAACA
ATCTCTGAGC TTGCAACTCG CCCTTACCCT GGTCATAAGC AGGAGCTGGA AGAGGCTACA
AACTTCCTTA ATTACCTAAG TAATCACCAT TTTACGCTTC TTGGTTATCG CCGATACGAT
CTGCGCAAGG TTGCTGGTGA TTTAGAGTTG GTACCTGACA CTTCAAGTAG CTTAGGCTTA
ATGAATATTC CGGGTAAACC ACAGCCTGAA ACTGGCTTAT TACTCTCTAA TTTTTCTGAA
AGTGCTCGTA GAGAAGCGCT AGATAACAGC TTACTGGTTC TAACTAAGAG TAGTGAGAAG
AGTCGTGTAC ATCGTCCAGC GTATGTTGAT TATGTCGGTG TTAAGCGATT TGATGAGCAA
GGAAATGTTA TCGGCGAAGA TAGGTTCTTA GGTTTATATG CTTCGAATCT ATATAACAGA
AGCCCACGTG AGATCCCGCT TCTATCAGAG AAAGTGCAAC GTGTGTTAGA CCGTTCAGGG
TTAACCCCGC GCTCTCATGA TTACAAAGCT TTGATGCATA TTTTAGAGAC GCTTCCTCGT
GATGAGTTAA TTCAAGGTAA TGTTCAAGAG CTTGCTCAGG TCGCCCATGG CGTTCTAGAG
ATGCAAGATC GTGACAAATT GAAGCTGTTT GTCCGTAAAG ATGGTTTTGG GCGCTTCTTC
TCATGTCTAG TTTATGTCTC TAAAGACAGA TATAACACTA AGCTACGTGA AGATACTCAA
CGTATTCTGG CTCAACACTT TAAAACTAAC GCCGATGTTG AATTTACGAC CTACTTCTCA
GAATCTACGC TTGCGCGTAC GCATTACATA GTTAAAGTCG ATAACAATAA TATGGATGTA
GATGTGGCCG CCATTGAAAA TAATTTATCA GAAGCTGCAC GTTCTTGGGA AGATAAACTC
AATGATGCGC TAAGCAGCAC ACAGGGTGAA GAGTCTGGAA CGGGTCTGAC TAAACGTTAT
ATACATGCGT TTCCTCGCAG TTATAAAGAG GATGTACTAC CAAGCTCTGC AGTTGTTGAT
ATTCAGCATT TAGAAGCGTT AGATGACAGC CATAAGCTGG GCATGCTCTT CTACCAACCG
CAGGAAACGG CGCTAAATAA CAGTAAAGTT CGATTAAAGC TGTTCCATAA AGATGAGCCG
ATCCATCTTT CTGACGTCCT GCCTATGCTG GAGAACTTTG GTCTTCGCGT GATAAATGAA
AGACCTTATG AGTTAAAAAC TTCAGAGAAC GACACTTACT GGATTTTAGA TTTCTTAATG
ACAGTGCAGG GGAGCTCGAC TCAAAGTATT GCCGACAGTC AGGTACGATT CCAAACAGCA
CTGGCTGATG TGTGGGATAA GCAGCTTGAA GATGATGGTT TTAACCGCCT ACTTTTAGAG
ACAACGTTGA GTGGCCGTGA AGTTTCAATA TTACGTGCTT ACGCTAAATA TATGCGTCAA
ATTGATGCAA CCTTCAGCCA AGCTTATATC GAAGAGACCT TTACTCGTTA CCCTCAGATA
GCTGAGCTAC TTGTGAAGAT GTTTATTCGT AAGTTTAATC CTAAGCTTAA GACTCGCACA
CTGAACAAGT TTGTTGAGCA GATTGACCTC TGTTTAGAGG ACGTCTCTAG TTTGGATGAT
GACCGTATTA TTCGTCGTTA CCTCGACTTG ATTAATGCAA CATTAAGAAC CAACTTCTAC
CAAGTTGCAG CCGACGGTAG TGACAAAGAG TATGTTTCAT TTAAGTTCTC GCCAGAGCTT
ATTCCTGAGA TGCCTCGTCC ATTGCCTAAG TTTGAGATTT TCGTGTACTC CCCAAGAGTC
GAAGGTGTTC ATCTACGTGG CGGTAAAGTG GCCCGTGGTG GTCTACGTTG GTCAGACCGT
CGTGAAGATT TCCGTACTGA GGTGCTTGGC TTAGTTAAAG CACAGCAAGT TAAAAACACG
GTTATTGTTC CAGTGGGTGC TAAAGGTGGT TTTGTCTGTA AACAGCTGCC AACAGAGGGG
GGGCGTGAAG CCTTCTTTAC TGAGGGGCAG GAGTGTTACC GCATCTTTAT TCGTGCACTT
TTGGATGTCT CAGACAATAT TATTAATGGT GAAGTTGTTC CTCCTGTTAA TGTTGTTCGA
CACGATGAAG ATGACCCTTA CTTGGTTGTT GCGGCGGATA AAGGAACTGC AACTTTCTCG
GATATCGCCA ATGCCATCTC TGAAGAGTAC AACTTCTGGT TGGGAGATGC GTTTGCATCA
GGCGGAAGTA ACGGTTATGA CCATAAAAAG ATGGGGATCA CAGCCCGTGG TGCTTGGGAG
TCTGTTAAGC GTCACTTCCG TGAAATTGGT ATCGATTGTC AGACCACAGA CTTTACCTGC
TTAGCGGTAG GTGACATGGC GGGTGATGTA TTCGGTAATG GTATGTTGCT GTCTGAACAT
ACACGTCTTG TGGTTGCATT TAACCATATG CATATCTTTA TCGACCCAAC TCCGGATGCT
GAGTCAAGTT ATAAAGAGCG TGCTCGCTTG TTTGAGCTGC CTCGTTCGAG CTGGGAAGAT
TACAATAAAG AGTTGATCTC AAAAGGCGGC GGCATCTTTA TGCGCTCAGC CAAGTCGATC
ACCTTAACAC CAGAAATTAA GAAGATGCTT GAGACTAAGA AAGCATCTAT GACGCCGACG
GAGCTGCTAA AAGAGCTTCT GAAGATGAAA GTCGATCTGA TCTGGAACGG TGGTATCGGA
ACTTACGTTA AAGCCAGTAG CGAGACCCAC GCTGAAGTTG GTGACCGTGC CAACGATACT
TTGCGTGTTA ATGGTAATGA GGTTCAGGCC AGAATTATTG GTGAAGGTGG CAACTTAGGT
TGTACTCAGC TTGGTCGTAT TGAGTATGCT GCAAATGGTG GCCGCATGAA TACCGACTTC
GTTGATAACG TTGGTGGCGT GGATTGCTCT GATAACGAAG TGAATATCAA AATTTTGCTT
AATGCACTGG TTGCAGATGG TGAGATGACC TTAAAGCAGC GTAATCGCTT GTTAGTCGAT
ATGACTGATG AAGTGAGCCG GATTGTATTG CAGGACTGTA AAGATCAGAC CCGTACTATC
TCCGTGACTC AGGTACGTGG TGCAGAGCAA CTTAAAGAGC AGATCCGCTT TATTCACTAC
CTTGAAAAAG AGGGTAAGTT AGATCGCGCA CTTGAGTTCC TGCCGTCTGA AGATGAACTT
GCAGAGCGTT TAGCTAACGG TAAGCCGTTA ACCAGACCTG AACTTTCTGT ACTTGTCGCT
TATGCGAAGA TGGTACTCAA AGAGCAGTTG CTGACGCCTG AAATCACAGA TGATCCTTTC
TTGAGTCAGC TATTGATTGA GTATTTCCCT CAACAGCTGC AAGAAAAGTA CAGTGATCGT
ATGGTTGCTC ACCCTCTTAG GGCTGAAATT ATCGCTACTT CATTGGCAAA TGAGCTGGTG
AATGACTTAG GTCTTAATTT TGTACAACGT ATGCAAGATG AGACTGGTGC CTCAGTTGCT
GAAGCTGCCA TTTGTTATAC TATGGCTCGT GAAGTATTTG GTTTAGCTGG TTTAACTAAA
AACATTACAT CGCTAAATGG TATTATCCCT GCAGTTGTAC AGGGTGAGAT GTTGCATCAA
CTTCGCCGTA ATATACGTCG TGCTTGTCGT TGGTTCCTAC GTCACAGAAA TCGTGGTCAG
AGTATTCAGC AAACAGTTGA GTTTTTTGCA CCTGTATTTG CAGATCTTAA AGCGAATGTT
CACGGTTATA TGGTTGAGGA TGAAGTCGAA GGAATTCGTC TTGAAATTGC AGCGCTCATT
AAAGAGGGAG TCACAGAGGA AGTTGCAACG AACGTTGTAA ACATGAGTAC CCTGTTCTCC
GCTTTAGATA TTGCACAAAT TGCTGAGCTA GAAAGTAAGC CTGTTGCATT GGTTGCACAA
ACTTACTTTA AACTCGGTGC GCAGGTTGAC CTACACTGGT TCTTAGATCA GATAAGTGCT
CAGCCAGTTG CGAACCATTG GCAGGCACTA GCAAGGGCAG CATTTAGAGA GGAGTTAGAT
TGGCAACAGC GTTCATTGAG TTCAGTAGTA CTTCGTACTT GTACTGAAAC TTGTGATGCT
AACTCCATCA TTGCTCAGTG GATTGACTCC AATCAGGGCT TATTGGAGAG ATGGTTCCAC
ATGCTAGCAG ACTTTAAGAC ATCTCAAAGT CATGAGTTTG CCAAGTTCTC GGTTGCATTA
AGAGAGCTAA ACCTCTTGAT TCTTCATTGT GAAGGTCAAA AGTAA
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| Protein sequence | MALKDAMPSV LLENVVNLIH SKVPNAQAKQ VEQFANCLYA HMSKDDLKAR NDSDLYGAVL
SLWNAANLTE KGESHIRVFN PSQSKHGWQS THSIIEVIQP DMPFLVDSIS MALNRVGITS
HMILHTPLSI KRTKGSISQV RYCDDADDKF EKVAVFLIEI DRQSTNKDIK QLEKEIESVL
GDVAASVHDW KAMSGKLSST ISELATRPYP GHKQELEEAT NFLNYLSNHH FTLLGYRRYD
LRKVAGDLEL VPDTSSSLGL MNIPGKPQPE TGLLLSNFSE SARREALDNS LLVLTKSSEK
SRVHRPAYVD YVGVKRFDEQ GNVIGEDRFL GLYASNLYNR SPREIPLLSE KVQRVLDRSG
LTPRSHDYKA LMHILETLPR DELIQGNVQE LAQVAHGVLE MQDRDKLKLF VRKDGFGRFF
SCLVYVSKDR YNTKLREDTQ RILAQHFKTN ADVEFTTYFS ESTLARTHYI VKVDNNNMDV
DVAAIENNLS EAARSWEDKL NDALSSTQGE ESGTGLTKRY IHAFPRSYKE DVLPSSAVVD
IQHLEALDDS HKLGMLFYQP QETALNNSKV RLKLFHKDEP IHLSDVLPML ENFGLRVINE
RPYELKTSEN DTYWILDFLM TVQGSSTQSI ADSQVRFQTA LADVWDKQLE DDGFNRLLLE
TTLSGREVSI LRAYAKYMRQ IDATFSQAYI EETFTRYPQI AELLVKMFIR KFNPKLKTRT
LNKFVEQIDL CLEDVSSLDD DRIIRRYLDL INATLRTNFY QVAADGSDKE YVSFKFSPEL
IPEMPRPLPK FEIFVYSPRV EGVHLRGGKV ARGGLRWSDR REDFRTEVLG LVKAQQVKNT
VIVPVGAKGG FVCKQLPTEG GREAFFTEGQ ECYRIFIRAL LDVSDNIING EVVPPVNVVR
HDEDDPYLVV AADKGTATFS DIANAISEEY NFWLGDAFAS GGSNGYDHKK MGITARGAWE
SVKRHFREIG IDCQTTDFTC LAVGDMAGDV FGNGMLLSEH TRLVVAFNHM HIFIDPTPDA
ESSYKERARL FELPRSSWED YNKELISKGG GIFMRSAKSI TLTPEIKKML ETKKASMTPT
ELLKELLKMK VDLIWNGGIG TYVKASSETH AEVGDRANDT LRVNGNEVQA RIIGEGGNLG
CTQLGRIEYA ANGGRMNTDF VDNVGGVDCS DNEVNIKILL NALVADGEMT LKQRNRLLVD
MTDEVSRIVL QDCKDQTRTI SVTQVRGAEQ LKEQIRFIHY LEKEGKLDRA LEFLPSEDEL
AERLANGKPL TRPELSVLVA YAKMVLKEQL LTPEITDDPF LSQLLIEYFP QQLQEKYSDR
MVAHPLRAEI IATSLANELV NDLGLNFVQR MQDETGASVA EAAICYTMAR EVFGLAGLTK
NITSLNGIIP AVVQGEMLHQ LRRNIRRACR WFLRHRNRGQ SIQQTVEFFA PVFADLKANV
HGYMVEDEVE GIRLEIAALI KEGVTEEVAT NVVNMSTLFS ALDIAQIAEL ESKPVALVAQ
TYFKLGAQVD LHWFLDQISA QPVANHWQAL ARAAFREELD WQQRSLSSVV LRTCTETCDA
NSIIAQWIDS NQGLLERWFH MLADFKTSQS HEFAKFSVAL RELNLLILHC EGQK
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