| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2139 |
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| Symbol | |
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| ID | 6116402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2619311 |
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| End bp | 2621623 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633642 |
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| Product | hypothetical protein |
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| Protein accession | YP_001760518 |
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| Protein GI | 170726492 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.124395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGATA AAATAGTCAA TGGATTTGAA TCCTTCCTAT TTCGGCACAG GATTTTTGTC
ATACTCCTGT TTATGCTGAC CACCCTATTT TTGGGGTTTC AAGCAAGTAA CTTAAAGATG
GATGCGGCGT TTATTAAGAA TATTCCGCTA AATCATAGTT ATATGCAGAC CTATTTAAAA
CACCAGAAGC AGTTTGGTGG CGCCAACAGC ATTATGGTGG CGGTAGAGGA CACCAGCGGT
GATATCTTCA ACGAGACATT TTTCGATGCG TTGAAAAATG TTCACGATCA ACTTTTCTTT
ATCCCCGGAG TGGATAGGGC GCAGGTTAAA TCTCTTTTCT CCCCCTCAAC ACGCTTTACC
GAAGTGGTGG AAGATGGATT TGCCGGTGGT CCAGTGATCC CCGCAGATTT CTCAACCACA
GAGCTGGGAC TGTCTGTGGT TAGAGGGAAT ATTGAGAAAG CGGGCATTGT TGGACGTTTA
ATTGCTGAAG ATTATTCCGC AGCGATGGTG TCAGCACAGT TGATGGATTT TGACCCTCAA
ACAGGGGAGC CTCTAGATAC ACTCGCGTTT GCAGAACAGT TAGAGCAGGA GCTAAGAACT
CAGTTTGAAA ATGATGAGAT AAAAATCCAT ATTATTGGTT TTGCCAAGAT GGCGGGTGAT
GTGGCTGAAG GTGCCAAAGG CGTTATGCTT TTCTTCCTTA TTGCCATCTT AGTTACCGCG
GTAATGGTGT ACCTGTTTTC AAAATCATTA GTACTGACTT TTTTACCTTT GGCTTGTAGT
TTAATTGCGG TAATTTGGCA ATTAGGTTTG CTAACGGTTG TGGGCTTTGG CTTAGACCCA
ATGTCCATCT TGATCCCTTT CCTGGTGTTT GCCATTGGCG TGAGCCACAG TGTGCAGATG
ATCAATGCGG TGAGGAGAAG GGTAGCCGAT GGTGAGTCAA CTAAAGCAGC ATCAGCTTCC
GCTTTTCGTA GCCTACTCAT TCCAGGTGGT ATCGCTTTAC TCTCAGATAC AGTGGGTTTC
TTAACCTTAC TGGCTATTGA TATTGGTATT ATTCGTGAGC TAGCTATCTC AGCGTCATTG
GGCGTCGGGG TGATTATCCT GACTAACTTG ATCTTACTAC CTTTAGTTAT CTCATTTACT
AAAGTATCAG TGGCTAACAC CTCTAAAGAT CCAGCTGAAA GTAAAATTAA TCAGCTCTGG
AGAAAACTCT CTCTTTTTGC TACGCCTAAG TATGCAACTT GGGTGTTGAT AATTACCGCT
GTACTTTATG GGGTAGGTGT TCAGCAAGCG AGTTTGATGA AGGTGGGCGA TCTACAAGGC
GGGGCACCTG CACTGCACTT TGATTCAAGG TACAACCAAG ATACCTTTTA CATTACCGAT
AAATTCTCAA TAACCACAGA TGTCATGACT GTGATTGTAG AGGCGTTTCC CGAAGCCTGT
ACCTATCACT CAGTGCTTAA TCAAATTGAT GAGTTTGAAT GGATCATTGG TAACACACCT
GGGGTTGAGT CAACGGCGAG TTTAGCGTCA GTGGCCAAAA GGGTGAATGC TGGGTTTAAT
GAGGGTAATC CTAAGTGGCA GGTATTACCT AGAACAACAG CTAGCTTAGT TCAAGCGGTT
GGCCGAGTGC CTACAACTTC AGGACTGTTA AACAGTAATT GCTCTGTGAT GCCTGTTTAT
CTGTTTTTGA AAGATCATAA AGCAGAAACT ATTGAGTTAG TTATTGAGCG AGTTAAAGCG
CTCTCTGCTG AGATGGACAA TGATAAGATC CAATTTAAGC TCGCATCAGG CCCTGTAGGG
GTGATGGCTG CAACCAATGA AGCGGTGGCT GAAGCACAGT TCCCAATGAT GCTTTATGTT
TATGGTGCGG TTTTTGTCCT TTGTTTGATT AGCTTTAGAT CGTTAAGAGC AACAATCTCA
GTTATCTTGC CTCTTTATGT CGTTTCAACG TTGGCTCAGG CTCTAATGAC TCAGCTCGAT
ATTGGCCTGG CGGTGAGTAC TTTGCCTGTT ATTGCATTGG GGGTGGGAAT TGGTGTTGAT
TACGGCATCT ATATCTTGTC TACAATGGCG GTGAGGTTAA GGGACGGTAT GCCGGTTCAA
GAAGCATATT TCGAAGCACT CGTTGAGCGA GGAAGCGCAG TGATATTTAC TGGTCTGACC
TTAGCTATTG GTGTGAGTAC TTGGTTTTTC TCTGCCTTGA AGTTCCAGAT GGACATGGGG
ATCTTGCTCA CATTTATGTT TTTAGTAAAT ATGTTGGGTG CCATAATTAT TTTACCCGCT
ATCGGGGCAT TTTTCTGGCG AAAACCCAGA TAG
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| Protein sequence | MLDKIVNGFE SFLFRHRIFV ILLFMLTTLF LGFQASNLKM DAAFIKNIPL NHSYMQTYLK
HQKQFGGANS IMVAVEDTSG DIFNETFFDA LKNVHDQLFF IPGVDRAQVK SLFSPSTRFT
EVVEDGFAGG PVIPADFSTT ELGLSVVRGN IEKAGIVGRL IAEDYSAAMV SAQLMDFDPQ
TGEPLDTLAF AEQLEQELRT QFENDEIKIH IIGFAKMAGD VAEGAKGVML FFLIAILVTA
VMVYLFSKSL VLTFLPLACS LIAVIWQLGL LTVVGFGLDP MSILIPFLVF AIGVSHSVQM
INAVRRRVAD GESTKAASAS AFRSLLIPGG IALLSDTVGF LTLLAIDIGI IRELAISASL
GVGVIILTNL ILLPLVISFT KVSVANTSKD PAESKINQLW RKLSLFATPK YATWVLIITA
VLYGVGVQQA SLMKVGDLQG GAPALHFDSR YNQDTFYITD KFSITTDVMT VIVEAFPEAC
TYHSVLNQID EFEWIIGNTP GVESTASLAS VAKRVNAGFN EGNPKWQVLP RTTASLVQAV
GRVPTTSGLL NSNCSVMPVY LFLKDHKAET IELVIERVKA LSAEMDNDKI QFKLASGPVG
VMAATNEAVA EAQFPMMLYV YGAVFVLCLI SFRSLRATIS VILPLYVVST LAQALMTQLD
IGLAVSTLPV IALGVGIGVD YGIYILSTMA VRLRDGMPVQ EAYFEALVER GSAVIFTGLT
LAIGVSTWFF SALKFQMDMG ILLTFMFLVN MLGAIIILPA IGAFFWRKPR
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