| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2134 |
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| Symbol | pepN |
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| ID | 6116397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2611564 |
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| End bp | 2614143 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633637 |
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| Product | aminopeptidase N |
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| Protein accession | YP_001760513 |
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| Protein GI | 170726487 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.122956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.258257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAG GCTGGCATAT GACACAGATG AAAGCAAAGT ACCTTAAAGA TTACCTACCA
CCGGCATATA CGATCACCCA TATTGATCTT GATTTTAATT TAGCGGGTGA ACAGACCCGC
GTGCTCGCTA AGAGTCAACT TGTTAGAAGG GATTCGTCGC AGACAAAACT CGTGCTCGAT
GGCGATAAGA TGAAGATACT GTCGGTTAAG CTTAATGGTG AAGCGATCGA CTATGTTCAA
GATGAAACAA GTTTAACTAT TGAAGCCGAC TTTTCTGAAT TTGAGTTAGA GATAGTAACG
CAGCTCGATC CCGAGGCAAA CTCAAGCCTA GAAGGTCTAT ATATGTCAGA TGGTGCATAT
TGTACTCAAT GTGAAGCAGA AGGCTTTAGG CGCATCACTT ACTTCCTCGA TAGACCTGAT
GTATTGGCTA TCTACACCGT GCGAGTTGAA GCTGATAAAA GTGCATTCCC TTATCTGCTG
AGTAACGGAA ATTTAATTGA GCAAGGGACG CTTGAGGGCG GCCGACACTT TGTTCAATGG
CAAGACCCAT TTCCTAAACC TGCCTACCTG TTTGCGCTTG TTGCGGGTGA TTTCGATCTG
TTAGAAGATG AGTTTATTAC TCGTAGTCAA CGCCCTGTTA AGCTTCAGGT ATTCGTTGAT
AAAGGAAATT TGCATAAGTC ACATCATGCG ATGGCATCAT TGAAAAAGTC CATGGCTTGG
GACGAGTCCA GATTCGATCT CGAGTATGAC CTTGATATCT ACATGATCGT TGCTGTCGAT
TTCTTCAACA TGGGAGCGAT GGAAAATAAA GGGTTGAATG TTTTCAATAC TAAGTATGTA
TTGGCAGACA CTAGCTCAGC GACCGATGAT GATTACCATG GTATCGAGTC TGTTGTGGGT
CATGAGTATT TCCACAATTG GACTGGAAAC AGGGTGACAT GCCGTGATTG GTTCCAGTTA
AGCCTTAAAG AGGGCTTAAC CGTTTTTAGA GATCAAGAGT TCAGCTCAGA TCTAGGTTCT
CGTGCCGTTA ATCGTATTCA TGCTATTAAG GTGATTAAGA ATCAACAGTT CGCAGAAGAT
TCCGGCCCGA TGGCGCATCC TATTCGACCT GAATCTGTCA TTGAAATGAA TAATTTCTAT
ACAGTAACGG TTTATAACAA GGGTGCGGAA GTAATACGTA TGATGCATAC CTTGCTAGGA
GAAGTAGGAT TCCAAGCTGG TATGAAGCTC TATTTTGAGC GTCATGATGG ACAAGCTGTG
ACTTGTGATG ATTTCACTAC GGCCATGCAA GATGCAAGTG GAGTTGATTT AAGTCAATTC
ACCTTGTGGT ATAGCCAGTC AGGTACCCCT GTTGTGAGTG TAACTGAGAG TTTCGATGAG
GCGAAAGGGG AGTACAAACT AGTGATTGAG CAGCAAACTC CTGCCACTGT CGAGCAAACA
GCAAAAGCTG CGATGCATAT TCCTTTTGAC CTTGAGCTTA TCTCACCAGA TGGCGACTCC
ATGTTAAGTG AAGTCTTGGA TGTTAAGTCA TCTCATCAGG AGTTTGTGTT TAGCGGTTTA
GATCATAAGC CGACTCCGTC ATTGTTACAG AACTTCTCCG CACCAGTTAA ACTGCATTTT
GATTACTCGG TTGATCAATT GGTTCATTTG ATGCGTTTTG CATCCAGTGA AGTCGCTCGT
TGGGAAGCAT CCGTTGCCCT TATCAGTCAG TCAATCTGGG ATAATGTTGC GAATCTTGCG
GCTAAAAAGG CGATGCATCT AGATCTAAGA GTGAGTGATG CCTATCGTGG CGTAATATTG
TCTGATTCTT TAGATGCTTC ACTGGTGGCA GAAGTATTTA CTCTACCTAG TGTTTCAGCT
CTCATTGAAC AGGTAAATAG TGTTGATCTT GATGCTTTAG TGCTCGCTCG TGACTTTGTT
ATTGGGGAGT TGGCGTCCGC CTGTGAGGAT GAGTTATTAA CTCGTTACCG CGAGCAAGCT
GAGATTGATA AAGCAGGGGC TCGATCGCTT AAGAACGCTT GCCTATTACT TTTACAAAAA
GTGTCAGATC TGCACCAGCA ACATGCCCAA TCACAATATG AGCATGCACT GAACATGACT
GATAGCTTAG GGGCTTTACA AGCACTTAAC GGTGAGGAGT CTTCCCTGAG AGATAGCTTG
ATGGCCGACT ATGAAAAGCG CTGGCTAGAG ACACCACTTG TTATGGATAA GTGGTTAACT
TTGCAGGCAA CCTTAGGTTC TGAAACCTGT TTAGAGAGAT TAGAGAAGCT TACTGAGCAC
AGCTCATTCT CTTTCTCAAA CCCAAATAGA GTTCGCTCTT TAGTGGGGGC TTTCGCCGCT
GCTAACTTAG TTCAATTTCA TCGACTTGAT GGTAAAGGCT ATGATTTTTT GACTGAAACA
ATCATTAAAC TAAACAAGTT AAACCCACAA GTTGCAGCAA GGCTTATCAC ACCATTGATT
CAGTTTAAGA AGTTTGATCT TGATAGACAA AAACTAATGA AAGCATCATT GGAGAAGATT
TTAGCACTGC CAGATCTTTC TAAAGATCTC TATGAAAAAG TATCAAAAGC ACTTGATTGA
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| Protein sequence | MIEGWHMTQM KAKYLKDYLP PAYTITHIDL DFNLAGEQTR VLAKSQLVRR DSSQTKLVLD
GDKMKILSVK LNGEAIDYVQ DETSLTIEAD FSEFELEIVT QLDPEANSSL EGLYMSDGAY
CTQCEAEGFR RITYFLDRPD VLAIYTVRVE ADKSAFPYLL SNGNLIEQGT LEGGRHFVQW
QDPFPKPAYL FALVAGDFDL LEDEFITRSQ RPVKLQVFVD KGNLHKSHHA MASLKKSMAW
DESRFDLEYD LDIYMIVAVD FFNMGAMENK GLNVFNTKYV LADTSSATDD DYHGIESVVG
HEYFHNWTGN RVTCRDWFQL SLKEGLTVFR DQEFSSDLGS RAVNRIHAIK VIKNQQFAED
SGPMAHPIRP ESVIEMNNFY TVTVYNKGAE VIRMMHTLLG EVGFQAGMKL YFERHDGQAV
TCDDFTTAMQ DASGVDLSQF TLWYSQSGTP VVSVTESFDE AKGEYKLVIE QQTPATVEQT
AKAAMHIPFD LELISPDGDS MLSEVLDVKS SHQEFVFSGL DHKPTPSLLQ NFSAPVKLHF
DYSVDQLVHL MRFASSEVAR WEASVALISQ SIWDNVANLA AKKAMHLDLR VSDAYRGVIL
SDSLDASLVA EVFTLPSVSA LIEQVNSVDL DALVLARDFV IGELASACED ELLTRYREQA
EIDKAGARSL KNACLLLLQK VSDLHQQHAQ SQYEHALNMT DSLGALQALN GEESSLRDSL
MADYEKRWLE TPLVMDKWLT LQATLGSETC LERLEKLTEH SSFSFSNPNR VRSLVGAFAA
ANLVQFHRLD GKGYDFLTET IIKLNKLNPQ VAARLITPLI QFKKFDLDRQ KLMKASLEKI
LALPDLSKDL YEKVSKALD
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