| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2132 |
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| Symbol | |
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| ID | 6116395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2608744 |
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| End bp | 2609388 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633635 |
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| Product | putative solute/DNA competence effector |
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| Protein accession | YP_001760511 |
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| Protein GI | 170726485 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000562228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.054689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAAGTAA TGATGGAATC AACAGAGAAG TTGACCGACA CCAACGCAAT ACTTGCGTAT
TTATATGAAA CATTTCCTTT GTGCTTTATC GCCGAAGGTG AAACTAAGCC ATTAAAGATT
GGATTGTTTC AGGATTTGGC TGAAAGGTTG GCTGATGATT CTAAAGTAAG TAAAACCCAA
TTGAGAATTG CTTTAAGACG CTATACTAGT AGCTGGCGTT ACCTAAAAGG CGTAAAAGCG
GGTGCACAAC GTATCGATTT AGACGGTCAA GCGTGTGGTG AATTAGAGCA GGAGCATATT
GAACATGCTC AGTTGACTCT TAAAGAGAGC CAGGAAAAAG CTAAAGCGAA GCGTATTGCT
AAAGCAACAG CCGCTAAGGC TAGCGAAAAG GCAAGTAAGA AGCCTGCTAA GAAAGTCGCA
CCTAAGCGTA CAAAACCTGC ACCTAAGCCA GTTAAAGAAG CGGCACCAGC TGTTAATTTA
ACGCCTGCAG TACTAAATGA GCTGAAACAA AACCAGCGTG TTAATGTCAA ACTAGGTAAG
TCACCTGTTG CCGGTGTGAT TGTTGACATT AAGAAAGAAG ATGTTCAAGT ACAGTTAGAC
TCAGGTTTAA CAGTTAAAGT ACGTGTTGAG CACATAATGC TGTAA
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| Protein sequence | MEVMMESTEK LTDTNAILAY LYETFPLCFI AEGETKPLKI GLFQDLAERL ADDSKVSKTQ
LRIALRRYTS SWRYLKGVKA GAQRIDLDGQ ACGELEQEHI EHAQLTLKES QEKAKAKRIA
KATAAKASEK ASKKPAKKVA PKRTKPAPKP VKEAAPAVNL TPAVLNELKQ NQRVNVKLGK
SPVAGVIVDI KKEDVQVQLD SGLTVKVRVE HIML
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