| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2128 |
|---|
| Symbol | |
|---|
| ID | 6116391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 2606199 |
|---|
| End bp | 2606849 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641633631 |
|---|
| Product | paraquat-inducible protein A |
|---|
| Protein accession | YP_001760507 |
|---|
| Protein GI | 170726481 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0161094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0903453 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACA TCGATGAAAA TGCTCAAGGC AAGGAGATGG GATTAACCAC TTGCCCCTCC
TGTAATAAAC TAAATGAGCA GAAACAGACT CACTGTACTC GCTGTGATAG CCCATTAATG
GTACGAGATA CCACTAGCTT GCAAAAAAGC TGGGCGTTAC TTATCACCGC AGCCATCTTG
TTAATTCCGG CAAATATCTA TCCAATCACC ATGTTGACCG ATCGTGGGCG TATTCGCCAT
GACACCATCT TTACCGGGAT CACACACCTA GTACAATCCG ACATGTTTCC TATCGCGATT
ATACTGTTTA CCGCCAGTAT TTTAGTCCCT CTACTTAAAA TAGTCGGCTT AACGATTTAC
CTAACCGCCA TCAGTTTTCG TTTGCCCATC TCCAAGAAGA TGCTAATGGT AGGTTTCCAT
ATCATTGAAT GGATAGGACG TTGGTCCATG TTGGACCTAT TTGTCATATC CATCACTGTC
GCACTGGTTA ATATGGGGCA GCTCTTGGAT GCCAAGCCCG CCCCAGCCGC CACTGCATTT
GCATTAGTGA TTTTGCTGAC TCAGATGGCA GCAAAAGTAC TGGACACTCG TTTACTCTGG
GATCGACTGG AATCGAAAGA TGACAAAAAT AGAAGCACCA AAAGTCGTTA A
|
|---|
| Protein sequence | MSNIDENAQG KEMGLTTCPS CNKLNEQKQT HCTRCDSPLM VRDTTSLQKS WALLITAAIL
LIPANIYPIT MLTDRGRIRH DTIFTGITHL VQSDMFPIAI ILFTASILVP LLKIVGLTIY
LTAISFRLPI SKKMLMVGFH IIEWIGRWSM LDLFVISITV ALVNMGQLLD AKPAPAATAF
ALVILLTQMA AKVLDTRLLW DRLESKDDKN RSTKSR
|
|---|
| |