| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2125 |
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| Symbol | |
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| ID | 6116388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2601783 |
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| End bp | 2602388 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633628 |
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| Product | sortase family protein |
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| Protein accession | YP_001760504 |
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| Protein GI | 170726478 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.217102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0810323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTAAGT CTGTGCATTT TCACCGAGCA ATCATATTCA TGTTACTTGC TCTTGCGGGA
ATATTTCTTG GTCAGGGAGT CTATATGCAA GCGAAAGCAC ATTTTGCCCA ATACCTTATT
GAACAGGCAT GGAAGCGAAC ATTGGTGGAT CAACAGCCAC ATAAACCATG GAGCTGGGCT
GATACTTATC CTGTTGCCCA GATGACATTT ATCGATGAGC AAGGAGATAA AGAGGGGCTG
CTTACTGGAG ACTCGATGTA TGTTCTAGAA GGGGCATCGG GTAGAAATTT GGCTTTCGGT
CCAGCACAGC TTCAAGATGG TAGGGAGAGC TGGCGCGGCG AGAGTCGGAT TATTGCTGGT
CACAATGACA CCCATTTTTC CATTTTGGAG GGGGTGAAGC AGGGCAAACA GATTAAGCTG
CAGGAGAGGG ACGGAACTGA AGTGATCTAC CAGGTGGTGG GAACCCAAGT TGTGCATGAG
TCTGATACCC AAGTGCTTAA TTCTGATTCA GATAAACGAC TCACTTTGAT CACTTGTTAT
CCGTTCCATT CTCTAACAAC TGGCGGCCCG CTCCGCTTTA TTGTCTATGC TGAAGTGATC
GGTTAG
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| Protein sequence | MLKSVHFHRA IIFMLLALAG IFLGQGVYMQ AKAHFAQYLI EQAWKRTLVD QQPHKPWSWA
DTYPVAQMTF IDEQGDKEGL LTGDSMYVLE GASGRNLAFG PAQLQDGRES WRGESRIIAG
HNDTHFSILE GVKQGKQIKL QERDGTEVIY QVVGTQVVHE SDTQVLNSDS DKRLTLITCY
PFHSLTTGGP LRFIVYAEVI G
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