| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2124 |
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| Symbol | |
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| ID | 6116387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2599571 |
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| End bp | 2601790 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633627 |
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| Product | cell wall anchor domain-containing protein |
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| Protein accession | YP_001760503 |
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| Protein GI | 170726477 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1240] Mg-chelatase subunit ChlD |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0949935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0697413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGG ATAATCGCGG CTTCTTGGCA TTTAGTTTGG CTCCTTATTT ACTCACCATG
CTTGCCCCCT TTAGGGGGGC GGCTGTCATT AATATACTTA CTATCGGACT GCTATCTTGT
TTGAGTTTGT TCAGTTATGC CCAAGAGAGG ATTGAGAGTG ATCAAGCAAG CTTGATCTAT
CACTCCGGTG ATGGTGAGGA ACATGTGAGC TTACCACTTA CGACACAAGT TGAGATGAAG
GTGTCGGGCT GGACAAACCG GGTCAATTTT AGACAGGTAT TTCGCAACGA CACTCAACAC
TGGCTCAATG GCCGTTATCA ATTCCCACTG CCCGATGAAG CAGCGGTGGA TCATATGCGC
TTAGAAGTCG GCAGTAAGGT CATAGAGGGG CAGATTAAGG AGAAGCTCAA AGCAAAAAAG
CAGTTTGAAA TGGCAAAAAA AGCAGGTAAA CGTGCCAGTT TAGTCTCTCA ATCTACTCCC
AATATCTTCA CTACCTCAGT AGCCAACTTA GGACCTGGTG AAGCCTTGGT GGTGGAGATC
AGTTATCAAG AGTTGGTGTC CTATAAAAAA GGGGAGTTTA GCCTTAGATT TCCTATGGTA
GTCAATCCAC GATACTTCTC TCCTTTATCA ATGCAGGAAC AAAAGAGCCG CAGTGTTAGC
TTCGCAAACA CCTTAGCTAC AATTGAAAAT GGCACGGCGT TCAATGACCA TATTGGAATA
GATGCTGCCG CCAAAGTGAG CATCGAGGTT GAGCTAGATG CTGGAGTAGA GTTAGGTCTG
ATATCGAGCC CCTATCATAA GGTAAGTCAC ACTCAGCTAA GTGGCTCTCA CTATCGAGTG
TCACTCACGG GGGTAAAGGC TGATCGAGAT TTTGTATTGA ACTGGCGACC ACAGCTTGAC
ACTAAGCCTG TTGCTGCTGT TTTCTCTCAG CAGGGTAAAA CACACTCACT ATCTTCTAAG
GCACAAGTTG AACCAACGGA CTCTAATGCG AGCACAAAGG CAGACAGCAA CAAAGCTGTG
GAGGATGATT ATGCTTTGCT GATGTTGTTG CCACCATCAG ATCAGAAGCA AGATGTATCT
ATTTCAAGAG AGCTTATCTT AGTGATAGAC ACCTCTGGCT CTATGTCTGG AGCATCGATT
GCACAGGCAA AACGTGCCCT TAATTATGCC CTTGCGGGGT TAAAAGCCAA GGATACTTTT
AATGTGATTG AGTTTAACTC TAACGTTGGT TCGCTATCTC CTTACTCTCT ACCCGCTACA
GCGAAAAATA TAGGCTTGGC TAATCAGTAT GTGCGTTCAC TTAAGGCCAA TGGCGGTACT
GAGATGCAAT TGGCACTCAA TGCTGCGTTA GACAAAGGTA CTGAGACTGA AGCGCTGGGT
AGTGAAAGAT TACGTCAGGT GCTATTTATG ACTGATGGCT CCGTTGGAGA TGAGCAATCC
CTGTTCCACC TTATTAAGCA GAAGATAGGT GAAAGCCGAT TGTTCACCTT AGGCATTGGC
TCAGCGCCAA ATTCACACTT TATGCGCAGA GCGGCTGAGT TTGGACGCGG CACGTTCACT
TACATAGGTA AGTTGGATGA GGTACAGAGT AAAATTGAGT CACTGCTTTA CCAGATAGAG
CGTCCTCAAT TGACTGATAT TAAACTGAGG TATGCCGATA ATAGAGTGCC GGATTATTGG
CCTGCCATGA TCCCTGATCT CTATGCTGAA GAACCTTTGT TAGTCGCAAT AAAGATGAAC
TCGACGCAGC ATGTATCATC TCCTACTGAA CTTATCGTAT CTGGCACCAT TGGGGGGCAA
TACTGGCAGG AAAGTGTATC ACTGAAGGAG AGAAAGCCAG AGTTAGGTTT AGATCTTATC
TGGGCAAGGA AACAGATCGC AGCTCTTGAG TTGAGTAAGA ACGGGGTGAA TGAACAGAGA
GTAAAACAGC AGATCACCGC CTTGGCTCTG GACTATCACT TGGTTAGTGC TCATACAAGT
TTAGTGGCGG TTGAGATGAC TCCAGTAAGA GCCAGTGGTA TCACGAGTAA GAGTGTTGAG
TTGTTATCTG CTATTCCATT TGGTTGGGTG CCGCCTGCAA CGCTACCTCA AACAGGAACT
GCGAGTCGAC TGTTTATCTT GATTGGTGGT CTATTATTGA GTTTGCTGGG GATCTACCTT
CTAAGTTATT ACCGTGCATT TGGCTTAGTG TTCAGTCCTC AGGAGAGGAG AGATGCTTAA
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| Protein sequence | MKTDNRGFLA FSLAPYLLTM LAPFRGAAVI NILTIGLLSC LSLFSYAQER IESDQASLIY
HSGDGEEHVS LPLTTQVEMK VSGWTNRVNF RQVFRNDTQH WLNGRYQFPL PDEAAVDHMR
LEVGSKVIEG QIKEKLKAKK QFEMAKKAGK RASLVSQSTP NIFTTSVANL GPGEALVVEI
SYQELVSYKK GEFSLRFPMV VNPRYFSPLS MQEQKSRSVS FANTLATIEN GTAFNDHIGI
DAAAKVSIEV ELDAGVELGL ISSPYHKVSH TQLSGSHYRV SLTGVKADRD FVLNWRPQLD
TKPVAAVFSQ QGKTHSLSSK AQVEPTDSNA STKADSNKAV EDDYALLMLL PPSDQKQDVS
ISRELILVID TSGSMSGASI AQAKRALNYA LAGLKAKDTF NVIEFNSNVG SLSPYSLPAT
AKNIGLANQY VRSLKANGGT EMQLALNAAL DKGTETEALG SERLRQVLFM TDGSVGDEQS
LFHLIKQKIG ESRLFTLGIG SAPNSHFMRR AAEFGRGTFT YIGKLDEVQS KIESLLYQIE
RPQLTDIKLR YADNRVPDYW PAMIPDLYAE EPLLVAIKMN STQHVSSPTE LIVSGTIGGQ
YWQESVSLKE RKPELGLDLI WARKQIAALE LSKNGVNEQR VKQQITALAL DYHLVSAHTS
LVAVEMTPVR ASGITSKSVE LLSAIPFGWV PPATLPQTGT ASRLFILIGG LLLSLLGIYL
LSYYRAFGLV FSPQERRDA
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