| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2120 |
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| Symbol | |
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| ID | 6116383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2594310 |
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| End bp | 2595485 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633623 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_001760499 |
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| Protein GI | 170726473 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0806136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0524634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG ATACCCAGAT AGTCAGTGTC GGACGTGATA AAAAATGGAC TAAAGGGGTG
ATAAACCCGC CTGTTTTTAG AGCATCAACC ATGGTATTCG ATACCATGGA GGAGATGCGT
TTTGCGACTA AAAATAGAGC CAAAGGAGAG ATGTTTTACG GCAGACGTGG CGGCCCAACT
CATTTTGCTT TTCAAGCAGC TATTGCAGAG CTTGAAGGCG GAGTAGGCAC TGCCCTCTAT
CCATCTGGTT CTGCGGCGAT TAGCGGTGCC CTGCTCTCAT TTCTAAAGGC TGGCGATCAC
CTTCTGATGG TCGACAGCGC TTATGAACCG ACGCGGGATC TCTGTAATAA ACTGCTGGCA
GGTTTTGGCA TAGAAACCAC CTATTATGAT CCTATGATAG GTGCAGGAAT CGAAGCCCTG
ATTAAGCCCA ACACTAAGGT GCTATTTCTC GAATCCCCCG GCTCCATCAC CATGGAGATC
CAAGATGTCC CCACCTTAGC AAAGGTCGCG CACCAACATG GATTAACAGT GATGTTAGAC
AACACTTGGG CATCTCCTAT CAACTCTCGT CCATTCGAGA TGGGAGTGGA TATCTCTATT
CAAGCAGCCA CTAAATACAT TGTTGGCCAC TCAGATGTAA TGATGGGTAC AGCAACCTCT
AACGAGGCCC ATTGGGATCA ACTAAGAGAA AATAGCTATT TAATGGGACA ATGCACCTCA
CCTGATGATG TCTACCTTGC CAGTCGAGGT CTGAGAACAT TAGGCGTGCG TATGCAGCAA
CATGAGCGTA ATGCGCTTAA AGTGGCAAAT TGGTTACAAT CTCGCCCAGA GGTTGACCAC
ATAAGGCATC CAGCTTTCGA CACTTGCCCA GGACATGAGT TTTTTGAGCG TGATTTTAGC
GGCTCCAACG GTCTGTTCTC TTTTGTATTA AAAGAGGGTT CTCTAAATTC AGTCACCGCA
CTGGTTGAGA ATATGGCTCA TTTTAAGATG GGATTCTCTT GGGGAGGATT TGAGAGCCTA
ATTTTGGGCG TATTTGGTAT CGACAGGCTT CGCACCGCAA CCCATTGGGA CAGCAGCAAA
CCGCTTATCC GTCTTCATGT TGGTCTTGAA GATCCTGATG ATCTGATTGC CGATCTCGAA
GCGGGTTTCG AGCGATTTAA CCAAGCATTG AAATAA
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| Protein sequence | MKKDTQIVSV GRDKKWTKGV INPPVFRAST MVFDTMEEMR FATKNRAKGE MFYGRRGGPT
HFAFQAAIAE LEGGVGTALY PSGSAAISGA LLSFLKAGDH LLMVDSAYEP TRDLCNKLLA
GFGIETTYYD PMIGAGIEAL IKPNTKVLFL ESPGSITMEI QDVPTLAKVA HQHGLTVMLD
NTWASPINSR PFEMGVDISI QAATKYIVGH SDVMMGTATS NEAHWDQLRE NSYLMGQCTS
PDDVYLASRG LRTLGVRMQQ HERNALKVAN WLQSRPEVDH IRHPAFDTCP GHEFFERDFS
GSNGLFSFVL KEGSLNSVTA LVENMAHFKM GFSWGGFESL ILGVFGIDRL RTATHWDSSK
PLIRLHVGLE DPDDLIADLE AGFERFNQAL K
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