| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2119 |
|---|
| Symbol | |
|---|
| ID | 6116382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2593579 |
|---|
| End bp | 2594247 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641633622 |
|---|
| Product | peptidase S51 dipeptidase E |
|---|
| Protein accession | YP_001760498 |
|---|
| Protein GI | 170726472 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3340] Peptidase E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.101457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0434672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG CATTACTCAG CTCTCCTACC TCTTCAAATG GTATCGATGC GATAAAGCAG
ATATTAGCTG TTCAGAAAAA GAAGGTATGT AAGCTTGCTT ATATCGCCTC TGGTCCTGAG
CCCGATAGAA GGTATTTTAG TCAGACCCAA ACGCTTTATG AGGAGTTAGG CGCTCAGATG
CCACTTTTTG TCGAGCTTGA GTCGGAGTTT GATGACGATA TTTTGCCAGA GCTATTTGGT
TGCGACGTTA TCCACCTCGC AGGTGGGGAT ACCTTCCGGT TTTTAAAAGG GTTAAAGCGA
AGAGGGCTGC TGCCTAAATT AAGGCAGTAT GTCGAAGCGG GTGGGGCGTT AGTTGGTGTG
AGCGCTGGTG CTATGATCAT GACACCATCA ATTGAGAGTG CTTTTTTGTG TGGTGATAGT
AATGATGTTG AGCTCAAGGA TTTATCGGCT TTAGAGTTAG TGCCATTTCA CTTTATGCCG
CATCTGCCTA GCGAATTATC AACTCCAGTG GATTTTATTG CAGAGCTGCA GCGCAAAGAT
GTTGAGTTTG ATGAGGCGTT GTTTGAGTCT CTCTATCTGT GTCAGGATAA TAGTGCACTG
GTTCTTATCG ATGGAGAGCT AGAGGAGCTG GGTTCACCGC TTCTTTGGAC AAGCTGTGTT
GAGTGCTAA
|
|---|
| Protein sequence | MKLALLSSPT SSNGIDAIKQ ILAVQKKKVC KLAYIASGPE PDRRYFSQTQ TLYEELGAQM
PLFVELESEF DDDILPELFG CDVIHLAGGD TFRFLKGLKR RGLLPKLRQY VEAGGALVGV
SAGAMIMTPS IESAFLCGDS NDVELKDLSA LELVPFHFMP HLPSELSTPV DFIAELQRKD
VEFDEALFES LYLCQDNSAL VLIDGELEEL GSPLLWTSCV EC
|
|---|
| |