| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2116 |
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| Symbol | |
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| ID | 6116379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2590554 |
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| End bp | 2591543 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633619 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001760495 |
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| Protein GI | 170726469 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0286626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0851142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGGGA TAAATCTCGG AGCCATTAGT GCTACTTTTG TGATCGCAAT AGGGTTACAG
CATAACGTTT TTGCCCAAGA CGTTAAACCC ACATCCAGTT TTCAGCAATT CCTTTCTAAC
CTTAAGCAGG AAGCAAGAGA GAAGGGGATA GCTGAGCAGA CGTTAGAATC GAGTTTTTCC
AATATCAAGT TGTTTAGAGC TGCGCAAGAC AGCAGTAAAA CAGCTGAAAA GTCGATGACC
ACCTTAGAGA CCTATATTCC TGAGCGCGTT CCTGAGTGGA AAGTGGATAA GGCCAGAGCT
CAGTTCCTTC AATACAAGAC AGAGCTTAAG GCTATTGGCG ATAAGTACGG TGTTCAGCCC
AGATTTCTCG TTGCGCTTTG GGCACTGGAG TCTGATTTTG GTGAAGCGAT AAGTCAGTAC
CCACTGCTGT CAGTTACCGC CTCAAAAGCT TTTGATAAAC CAGAACGTGT CGACTACCAA
GAGGAGGTTT TTGCGACTTT GCAGATCCTT GAGCAGGAGT CCTTGCAAGT TAGTGAACTT
AAAAGCTCAT CTAAAGGGTT AGTGGGTCAG CCTCTATTTT TGCCCAGTCA ATACCTTCTT
TATGCACAAG ATGGGGATGG CGACGGAAAG ATTGATCTAT GGGGCAATCC TCAAGATATC
TTTGCATCTC TTGCTAATTA TTTAAAGCAA GTTGGTTGGA AAGGTGAGCA GACTTGGGGA
CGACAGGTAT TGTTACCAGA GAACTTTGAT GTCAACGACT CATCTAATGG GATCTCCAAA
ACGTTTTCTC AATGGGGGGA ACTAGGGATA AGCCGCTATA ACGGTAAGGC GCTTCCAAAT
CGAGATGATA TGTTGGTTTC ACTCATTATG CCTGACGGTG CAAAGGGGCG AGCCTATCTG
GTTTACGATA ACTATCGTAC TTTAATCAAA CGAATGGACT CCGACTATCA AGCTTTGTCG
GTGACCTATC TTTCAGAGCG CATTAGATAG
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| Protein sequence | MTGINLGAIS ATFVIAIGLQ HNVFAQDVKP TSSFQQFLSN LKQEAREKGI AEQTLESSFS
NIKLFRAAQD SSKTAEKSMT TLETYIPERV PEWKVDKARA QFLQYKTELK AIGDKYGVQP
RFLVALWALE SDFGEAISQY PLLSVTASKA FDKPERVDYQ EEVFATLQIL EQESLQVSEL
KSSSKGLVGQ PLFLPSQYLL YAQDGDGDGK IDLWGNPQDI FASLANYLKQ VGWKGEQTWG
RQVLLPENFD VNDSSNGISK TFSQWGELGI SRYNGKALPN RDDMLVSLIM PDGAKGRAYL
VYDNYRTLIK RMDSDYQALS VTYLSERIR
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