Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2098 |
Symbol | |
ID | 6116361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2571266 |
End bp | 2572567 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641633601 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001760477 |
Protein GI | 170726451 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000978799 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.232961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAG CAGGGCCAAG AATTGTTATC ATTGGCGGTG GCGCCGGAGG ATTAGAGCTA GCCACTCAGC TAGGACACAA GCTGGGGAGA AAAAACCGTG CTCAGATTAT CCTTGTCGAT AAAAATCGTA CCCACATATG GAAACCCCTG CTTCATGAGG TCGCCACTGG CTCACTGGAT TCCGATCTCG ATGGCGTTGT CTACTCTGCT CATGCTGCAA AACATGGCTA CCAATTTCAG CTTGGAACTT TCTGTGGACT CAATGCTGAA ACGAAGCAGA TCACCATGGC TCCTATTGCC GATGATGCTG GTCATACTAT CTTGCCTGAA CGTCAGATCT CATACGATAA ATTAGTGATA GCTATCGGCA GTGTCAGCAA TGATTTCAAC ACCCCAGGCG TAAAAGAGAA CTGCTTCTTC CTCGACTCCC ACCAGCAGGC AAATCGTTTT CACGATGCCC TACTGGACTG CTTTACCCGA GTCCACCAGT CAGAATCTAT TAACCAGCTC AACATCGCCA TCGTTGGCGG CGGTGCAACA GGAGTTGAGC TTTCAGCAGA GCTTTACCAT GTCACCGAGA TGTTGAAAAT CTATGGCTTA AGCAAGATGA CAGCTGAAAA ACTCAATATC CACCTTATTG AAGCTGGCCC TCGTATTCTC CCTGCACTGC CTGAGCGTAT TGCAGGCTCT GCCAGACGTG AGTTGACTAA GCTGGGTGTC AATGTGATGG AAAACACCCG CATCAGCGAA GCCACAGCTC AAGGGTTTGT CACCTCTGAA GGAGAGGTGA TTGAAGCCAA CTTGATGCTA TGGGCCGCAG GAGTGAAAGC GCCAGACTTT ATCAAGTCGA TTGAACTGTT TGAGCTAAAC CGCGCCAATC AGATCATGGT CAAACCTAGC CTACTTAGCA CTGTCGATGA GGCTATCTAT GTGATCGGGG ATTGTTGTGC TTGCCAACAA GCCGATGGCA GCTTTGTTCC ACCACGTGCA CAGTCGGCGC ACCAAATGGC TGAATGTGTA GAGAAAAACA TTATTAACGA GCTCAACGGT GAACCAAGAG AAGCTTACAC CTATGTGGAT CATGGTTCAC TGGTTAATCT CTCACGTTTC AGTACTGTGG GCAGCTTGAT GGGTAACTTG ACTAAGAACA GCATGTTCAT TGAGGGCAGA ATTGCTCGTC TAGTTTATAT CTCTTTGTAC CGCATGCACC AAAGAGCCAT ACACGGCAGC GTTAAAACCC TCGGACTCTG GTTTGCCGAG AAAGTAATGC GCGTTGTCAG ACCGAGAATG AAGCTGCACT AA
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Protein sequence | MNAAGPRIVI IGGGAGGLEL ATQLGHKLGR KNRAQIILVD KNRTHIWKPL LHEVATGSLD SDLDGVVYSA HAAKHGYQFQ LGTFCGLNAE TKQITMAPIA DDAGHTILPE RQISYDKLVI AIGSVSNDFN TPGVKENCFF LDSHQQANRF HDALLDCFTR VHQSESINQL NIAIVGGGAT GVELSAELYH VTEMLKIYGL SKMTAEKLNI HLIEAGPRIL PALPERIAGS ARRELTKLGV NVMENTRISE ATAQGFVTSE GEVIEANLML WAAGVKAPDF IKSIELFELN RANQIMVKPS LLSTVDEAIY VIGDCCACQQ ADGSFVPPRA QSAHQMAECV EKNIINELNG EPREAYTYVD HGSLVNLSRF STVGSLMGNL TKNSMFIEGR IARLVYISLY RMHQRAIHGS VKTLGLWFAE KVMRVVRPRM KLH
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