| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2093 |
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| Symbol | |
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| ID | 6116356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2565225 |
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| End bp | 2566088 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633596 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001760472 |
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| Protein GI | 170726446 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.369123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA ATCATAACAA GCACATCAGT TTTAATGATT CACACAAAAT CTGTTTCCGC
CAACATGCGT TAACGGAGTA CCTCAGCTGG GCTCATTATC AAAACAGCGA GGAACGTTTG
TTCTACATCA ATGATAAACA GCACACCTTA AGCATGTATT TGAGTGGGGG TTATGAAACT
CACAGAACTG ATATTCAAGC AGATTTTGGT GGGCCAGGTC GATTCAGCTT AATGCCTAAA
GACAGTGAAA GCCGCTGGCA ACTTGGCATA CCACAGCAAT TTATGCACCT CTACTTTGAT
GATAACTACC TTAAACAGCT CGCTCTGAAA GTCTTCGATA TGGACCCTAG AACCATAGAG
GTTCCTGAGC TTACCTTCTT TGAAAACCCA GGCTTGGAAT CACTGTTTAG ATATCAAATA
GCCAATATAG GCTGGCACAG CCAAAGTCAC CTTGCTCTGG AGCAGATAAC TAACACAGTA
CTGGTGTCCA TGTTGCAGAG CAGCGGGCTG ACAAAGTCCT TAAATCGAGT AAAGGGCGGA
CTTGCTCCCC ATATTGCAAG ATTAATCAGT GACTACATGC ATCAACATTT TCACCGTCAG
ATCTATCTTT GTGAGCTGGC CGATTTAGCT CAGCTTAGTG AGTATCATTT CTGCCGCATG
TTTAAAGAGA GTTTTGCACG CACGCCACAA GAATACTTAA CCTATATCCG AATAGAACAG
GTTAAACACC GACTTAAAAC AAGCGCACAG AGCTTGTCAG ATATCGCCCT TGACTGTGGC
TTTGCAAATC AGAGCCATAT GGGAAGGTAC TTCAAAAAAC AGTTTGGGAT CACGCCCAGA
GCATTTCAGA AAAGCCAACT CTAA
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| Protein sequence | MSENHNKHIS FNDSHKICFR QHALTEYLSW AHYQNSEERL FYINDKQHTL SMYLSGGYET
HRTDIQADFG GPGRFSLMPK DSESRWQLGI PQQFMHLYFD DNYLKQLALK VFDMDPRTIE
VPELTFFENP GLESLFRYQI ANIGWHSQSH LALEQITNTV LVSMLQSSGL TKSLNRVKGG
LAPHIARLIS DYMHQHFHRQ IYLCELADLA QLSEYHFCRM FKESFARTPQ EYLTYIRIEQ
VKHRLKTSAQ SLSDIALDCG FANQSHMGRY FKKQFGITPR AFQKSQL
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