| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2087 |
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| Symbol | |
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| ID | 6116350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2558915 |
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| End bp | 2559652 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633590 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001760466 |
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| Protein GI | 170726440 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.325317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTC CAGCAATCGA TCTTATTGAA GGTCAAGTTG TACGCCTCTA TCAAGGTGAC
TATAAACAGA AGACCACCTT CGATTTAAGC CCGCTTTCTC AGCTTAAATC CTATCAAGAC
CAAGGCGCTA GTTGGCTACA TATTGTGGAT CTGACTGGGG CCAAAGACCC TGACAAACGT
CAGACAAATT TAATCGCTGA TTTGGTCGAT GGGCTCGACG CCAATATTCA GGTCGGTGGC
GGCATTCGCA GCGAAGCACA AGTGATAGAG CTGCTCGACA TTGGTGTAAA GCGTGTGGTT
ATCGGCTCAC TTGCCGTAAA AGAAACAGCG CTAGTACAGA GCTGGTTTGA AAAATATGGC
GCCGAGGCTA TCTGCTTGGC ATTGGATGTC AATATCGATG AGCAAGGCGA AAAAATTGTC
GCGGTATCGG GCTGGCAATC TGGCGGCGGT AAAACTCTCG AATCTCTGGT TGAAGCTTTT
AAGCCCTATG GACTAAAACA CGCTTTGGTG ACAGATATTA GCCGAGATGG CACTTTGCAA
GGTGCAAACA CGCAACTCTA TCGCGAAATA GCAAGCAGCT ACCCTCAGAT AAAGTGGCAA
GCATCTGGAG GCATTGCCAG CCTCGATGAT GTTGCAGCAG TCAGAGATAG TGGCGCTAAT
GGCATCATCA TAGGCAAAGC GCTATTGATT GAAAACTTTA ATGTAGAGCA AGCCATTACC
TGCTGGCCAA ATAGCTAA
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| Protein sequence | MIIPAIDLIE GQVVRLYQGD YKQKTTFDLS PLSQLKSYQD QGASWLHIVD LTGAKDPDKR
QTNLIADLVD GLDANIQVGG GIRSEAQVIE LLDIGVKRVV IGSLAVKETA LVQSWFEKYG
AEAICLALDV NIDEQGEKIV AVSGWQSGGG KTLESLVEAF KPYGLKHALV TDISRDGTLQ
GANTQLYREI ASSYPQIKWQ ASGGIASLDD VAAVRDSGAN GIIIGKALLI ENFNVEQAIT
CWPNS
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