| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2073 |
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| Symbol | |
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| ID | 6116336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2542077 |
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| End bp | 2543297 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633576 |
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| Product | PqiA family integral membrane protein |
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| Protein accession | YP_001760452 |
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| Protein GI | 170726426 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
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| TIGRFAM ID | [TIGR00155] integral membrane protein, PqiA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.225141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAATTA AGAATATAGA ATCAAATGTT TCGGGTGAAA GGGAAGTTTG CCATGAGTGT
GACCTGAATG TTGTTATTCC AAGTTTAAGG GTAAATCAAA AAGCAGTCTG CCCTCGTTGT
GGTTATCTGT TATCGGCTAA ACGTGCAAAC TCCCTAGAGC GCATTTTAGC GCTCTCAATC
ACCGCATTAA TATTTTTGTT AGCATCAACA CTCTTTGACT TTATCTCTTT TAAATCAAGT
GGTTTGGAAA ATAACATTAA GATGTTGGAC AGTGTCGGTA TTTTGATCGA CAGTGGTTAT
ACGGCATTGG CCATTATTGA GCTTGTTACC GTATTTTTTA TTCCTGCTTT TGTACTACTT
AGCTTGATCT ATCTGCTCTC TTTTCTCATT AATGGCCGCT ACCCGCGGAA AGGGCATCGG
CTTATGGAGA TCATATTCAA ATTGATCCCT TGGAATATGG TTGAGATATT TTTGGTGGGC
ACCTTGGTGA GCTTAATTAA GATAATCTCA CTTGCGGATA TTATCTTAGG CCCCTCATTT
TTCGCTTTTA TTTTGTTCTC GGTTTCCATG ACTGCTGCTT TGCTGCATAT CGATAGGCGC
TATCTATTTC AGGCTTTAGA CTCGAGATAT ACAGAGAATA CTAAAGCATC AACATCAGTG
AAGCAGGGGG AGCCTGCAGT TAACGAGAGT CTTGTTCATC ATGTGGATCC TAGTTTGTCA
ATCCAGAAAA CTTGGGCCTT GATTATCACC TCTATCTTGC TCTATATCCC TGCGAATACA
CTGCCAATCA TGAATACTCG ATTACTAGGG CAAGACGATC CTAGCACCAT CATTGGAGGA
GTGATTTTAT TGTGGCATCA CGGCTCTTAT CCTATTGCTA TGGTGATCTT TGTTGCCAGC
ATCATGGTGC CAATAGCCAA GATATTGGTG CTTATCTGGT TAAATTACAG TGTGCAAACC
AATTCGATGA AACTCGAGCA TCAAAGGATC ATACTTTATC GCATCGCTGA GTTTGTTGGC
CGCTGGTCCA TGATTGATAT CTTTGTGGTG ATTATTCTGG CAAGCCTAGT CCAGTTAGGA
AACACCATGA GTATTGTTCC TGGGGCTGCG ACTTTTGCTT TCTCTGGCGT TGTGGTTGTA
ACCATGTTGG CAGCAATGAG TTTTGAACCG AAATTAATTT ATAACTATAA GAGTGCTTAT
GAAAACAGAT CAACAAGTTG A
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| Protein sequence | MIIKNIESNV SGEREVCHEC DLNVVIPSLR VNQKAVCPRC GYLLSAKRAN SLERILALSI
TALIFLLAST LFDFISFKSS GLENNIKMLD SVGILIDSGY TALAIIELVT VFFIPAFVLL
SLIYLLSFLI NGRYPRKGHR LMEIIFKLIP WNMVEIFLVG TLVSLIKIIS LADIILGPSF
FAFILFSVSM TAALLHIDRR YLFQALDSRY TENTKASTSV KQGEPAVNES LVHHVDPSLS
IQKTWALIIT SILLYIPANT LPIMNTRLLG QDDPSTIIGG VILLWHHGSY PIAMVIFVAS
IMVPIAKILV LIWLNYSVQT NSMKLEHQRI ILYRIAEFVG RWSMIDIFVV IILASLVQLG
NTMSIVPGAA TFAFSGVVVV TMLAAMSFEP KLIYNYKSAY ENRSTS
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