| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2067 |
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| Symbol | pheT |
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| ID | 6116330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2534838 |
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| End bp | 2537225 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633570 |
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| Product | phenylalanyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001760446 |
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| Protein GI | 170726420 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0223695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTA GTGAATCTTG GCTTCGTGAG TGGGTCAATC CAAACATTAG CCGTGACGAG
TTGTCACATC AAATTACGAT GGCTGGTCTA GAGGTCGATG GCGTAGATGG TGTTGCCGGT
GAGTTCTCTG GCGTTATCGT TGGTGAAGTT GTCGAGTGCG GTCAACATCC TGACGCCGAT
AAATTACGCG TGACTAAGAT TAATGTCGGT CAAGATGAGT TAATCGACAT TGTCTGTGGT
GCATCTAACT GTCGTCTTGG CATCAAAGTG GCTGTGGCTA TGGTTGGTGC TGTACTGCCG
GGTAATTTTA AGATCAAGAA AGCCAAACTG CGTGGCGAGC CATCTTTTGG CATGCTTTGC
TCTTATGGTG AGTTAGGTAT CGATATTGAA AGTGATGGTA TTTTAGAGTT GCCATCAGAT
GCTCCTCTTG GTACCGATCT TCGTGAGTAC CTAAGTCTTG ATGATGCGGT TATCGACGTT
GATTTAACGG CTAACCGTGC CGATTGTCTT GGTATGGCTG GACTTGCCCG TGAAGTGGGT
GTACTTAATC GCCAAGCGGT AACTGAGCCA ACATGGGAAG CGGTTGTTCC CTCGATTGAT
GACAGTGTTC AGGTAGATCT TCAGGCACCA GCATCATGTG CTCGCTATTT AGGCCGAGTT
GTTAAGAACA TCAATGTGAA GGCTCAAACC CCACTTTGGA TGCAGGAAAA ACTGCGTCGT
AGTGGCATTC GCTCTATCGA TCCTATCGTT GATATTACCA ATTACGTGTT GATTGAGTTT
GGTCAGCCGA TGCATGCCTT TGATCTTGCA AAACTTGAGG GTGACATTCA AGTACGTATG
GGAAATGGCG CTGAGAAGCT CACACTGCTC GATGGTAACG AGATCACGGT TCCAGCGGAC
AGTTTAGTCA TCAGTGACGA AAAGAAGCCT CTAGCGCTTG CTGGGGTGTT TGGAGGTGAA
TTCTCTGGTG TTGGTGCTGA AACTCAAGAT ATTATGCTGG AATGTGCGTA TTTTGCGCCA
CTTGCTATTT TGGGTAAGAC TCGCCGTTTA GGTTTGCATA CTGACTCATC GCATCGTTTT
GAGCGTGGTG TTGACCCAGA GTTGCAACAT AAAGTGATGG ATCGTGCCAC GCGTCTAGTG
CTTGACATCT GTGGTGGTGA AGCGGGTCCT GTCTGTGAAG CTAAGTCAGA AGAGAACCTG
CCTAAGCCAG TTGGGATCAC ACTGCGCCGC AGCAAGTTAG ACCGTATTTT AGGCCATCAT
ATCAGCGATG CTGAAGTGAC AGAGATTCTT CAACGCCTAG GTTTCAATGT CGCGGTAAGC
GAAGGCCAAT GGGAAGTGGT AACAGCAACT TACCGTTTTG ATATGGCTAT CGAAGAGGAT
TTGATTGAAG AGGTGGCTCG TATCTACGGA TATAACAATA TCCCTAACAC GGCCCCCATT
GCTTCTTTGA GCATGCCTGA TCATAAAGAA TCAGATATCA GCTTAAAGCG AGTTCGTAGC
ATGTTGGTGT CTCGTGGTTT CCAAGAAGCT ATCACCTACA GCTTCGTTGA TCCTAAGATG
CAGGCACTGG TTCATCCAGA GCAAGAAGCG ATGATTTTAC CAAATCCTAT CTCAGTTGAG
ATGTCGGCAA TGCGCCTATC AACACTAACT GGTCTGTTGA GTGCGGTAGG GTATAACCAA
AGTCGTCAGC AGAATCGTGT TCGCCTTTTT GAATCTGGAT TACGCTTTGT TCCAGACGAA
AATGCTGATT CTGGCGTGCG TCAGCAGGCG ATGTTAGGTG CGGTTATTTC TGGTGCTCAA
AACGACGAAC ATTGGTCAAT GGAGTCAAAA ACTGTCGACT TTTTCGACCT TAAGGGTGAT
CTTGAGGCAA TTCTCGGCTT GACAGTATCC GACGAAGAAT TTACTTTTAG ATCAGCAGCG
CACCCAGCGT TACATCCGGG GCAATGTGCT GAAATATTAA GGAATGATAG AGTAATCGGT
GTTATTGGTG CAGTACATCC TAGTTTAGAG AAGCCTTTCG GACTCAATGG TAAAACAATT
GTTTTTGAAC TTGAATTAGA TGCTTTGTTG CATGCACGTC TTCCGCTAGC CCAGACTGTA
TCTAAGTTTC CTGCCAATCG TCGAGACATC GCCATCTTAG TTGATGAGGA AGTTTTCGCC
GGTGATGTTG TAAAAATGAT AAGAAAAGTT GGCCAAAATC AGTTGGTTGG CATAAACTTA
TTTGACGTAT ACCAGGGTAA AGGTGTTGAG CCGGGCCAAA AAAGCCTAGC GATTGCACTT
ACATTACAAG ACAACACTCG TACACTTGAA GAGAAAGAGA TAGCTGAGAT GGTTGATTCA
GTTGTTGACG CTCTTAAGAC CGAGTTCAAC GCATTGTTGA GGGATTAA
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| Protein sequence | MKFSESWLRE WVNPNISRDE LSHQITMAGL EVDGVDGVAG EFSGVIVGEV VECGQHPDAD
KLRVTKINVG QDELIDIVCG ASNCRLGIKV AVAMVGAVLP GNFKIKKAKL RGEPSFGMLC
SYGELGIDIE SDGILELPSD APLGTDLREY LSLDDAVIDV DLTANRADCL GMAGLAREVG
VLNRQAVTEP TWEAVVPSID DSVQVDLQAP ASCARYLGRV VKNINVKAQT PLWMQEKLRR
SGIRSIDPIV DITNYVLIEF GQPMHAFDLA KLEGDIQVRM GNGAEKLTLL DGNEITVPAD
SLVISDEKKP LALAGVFGGE FSGVGAETQD IMLECAYFAP LAILGKTRRL GLHTDSSHRF
ERGVDPELQH KVMDRATRLV LDICGGEAGP VCEAKSEENL PKPVGITLRR SKLDRILGHH
ISDAEVTEIL QRLGFNVAVS EGQWEVVTAT YRFDMAIEED LIEEVARIYG YNNIPNTAPI
ASLSMPDHKE SDISLKRVRS MLVSRGFQEA ITYSFVDPKM QALVHPEQEA MILPNPISVE
MSAMRLSTLT GLLSAVGYNQ SRQQNRVRLF ESGLRFVPDE NADSGVRQQA MLGAVISGAQ
NDEHWSMESK TVDFFDLKGD LEAILGLTVS DEEFTFRSAA HPALHPGQCA EILRNDRVIG
VIGAVHPSLE KPFGLNGKTI VFELELDALL HARLPLAQTV SKFPANRRDI AILVDEEVFA
GDVVKMIRKV GQNQLVGINL FDVYQGKGVE PGQKSLAIAL TLQDNTRTLE EKEIAEMVDS
VVDALKTEFN ALLRD
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