| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2060 |
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| Symbol | |
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| ID | 6116323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2526713 |
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| End bp | 2527354 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633563 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_001760439 |
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| Protein GI | 170726413 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.381908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAAGC TGAGTGATAT CAGACGAGAG TATTCATTGG GTGATCTCCA CAGAGACGCT
TTGCCTGATG AACCTATGAG CTTATTCTCT AAATGGATGG AGGAGGCGAG GGACTCTGAG
TTATTGAGCG ATCCTACCGC TATGTCCATT GCAACTGTGG ATGAGAGTGG ACAACCTTTT
CAACGTATTG TGTTGTTGAA GCGATTTAGT GAAGAGGGTT TTGTTTTTTT CACTAATTTA
GAGAGCCGTA AGTCGCAGCA GATAGCCCAT AACGCAAAAG TGAGCTTACT GTTCCCTTGG
CACTCTTTAG AGCGCCAAGT GGCGATAACT GGTGAAGCAG AGGCTTTGTC GACGGCCGAT
GTGATGAAGT ATTTTATCAC TAGACCGAAA GAGAGCCAGA TAGCCGCTTG GGTATCACAG
CAGTCGAGTA AAATTTCAGC AAGGCAAGTG CTTGAAACTA AATATGCTGA GATGAAGGCG
AAGTTTAGCA AAGGTGAAGT ACCGCTGCCT AAATTTTGGG GAGGGTATCT CGTCAAGCCT
TCGAGTATTG AGTTTTGGCA AGGCGGAGAG CGCAGACTTC ATGATCGCTT TCTCTATGAT
AAAGGGCAGT CTGGCTGGGA TATCTCTCGC TTAGCACCGT AA
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| Protein sequence | MSKLSDIRRE YSLGDLHRDA LPDEPMSLFS KWMEEARDSE LLSDPTAMSI ATVDESGQPF
QRIVLLKRFS EEGFVFFTNL ESRKSQQIAH NAKVSLLFPW HSLERQVAIT GEAEALSTAD
VMKYFITRPK ESQIAAWVSQ QSSKISARQV LETKYAEMKA KFSKGEVPLP KFWGGYLVKP
SSIEFWQGGE RRLHDRFLYD KGQSGWDISR LAP
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