| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2059 |
|---|
| Symbol | |
|---|
| ID | 6116322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2525750 |
|---|
| End bp | 2526679 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641633562 |
|---|
| Product | agmatinase |
|---|
| Protein accession | YP_001760438 |
|---|
| Protein GI | 170726412 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | [TIGR01230] agmatinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.44506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.429183 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAA TTGCTGACAA GCCCGATTAC TCTCTTTATT CCAATGCATT TGGTTATTTA
AGACAGCCAT TAGATTTCAA TCCTTTAAAA AGTGATGCCG ACGTGGTGGT TTTAGGTTTG
CCTTTTGATA TGGCAACCAC TGGACGCTCT GGTGGCCGTA TGGGACCTGG CGCAATACGT
CAGGCTTCGG TAAACCTTGC TTGGGAAGAG ACACGCTGGC CTTGGAACTT CAAACTAAGT
GATCATCTTA GTATTGTTGA TGCGGGCGAT CTGGTTTATG ACTGCGGTGA TTCTGCTGAT
TTTACCCAGA GAGTTGAAGA TTTCGCGACC GCGATTTTGG CCTCAGGTAA GGCGATGCTC
AGTTTCGGTG GCGACCACTT TGTTACTTTA CCGCTGCTTC GTGCTCACTA TAAGACTCAC
GGCAAGATGG CGTTACTGCA CTTTGACGCC CACACGGATA CTTACAGCCA AGGAAGTAAA
TATGATCATG GTACCATGTT CTTCCATGCG CCTAATGAAG GTATTATCGA TGCTGACCAC
TCTATTCAGA TAGGAATACG TACTGAATAT AATCGAGATG ATCACGCTTT TAAGGTCATT
GATGCTGCGA CGGCGAATGA TCTTAGTGCT GATGAGATAG TGGCTCAAAT TATTGAACGT
ATTGGCGATC TTCCTCTGTA CATCACGTTC GATATTGACT GTTTAGATCC CGCTTTTGCG
CCGGGTACAG GCACCCCTGT TTGTGGCGGT ATTACCAGCG ATAAAGCGAT GAAAATCATT
CGTGGTCTAG CCGGTGTCAA TGTTGTGGGT ATGGATGTGG TTGAGGTTGC GCCTGCTTAT
GATAACGCTG AAATTACAGC ATTAGCTGGT GCAACGTTAG GACTTGAGAT GCTGCACGTA
TGGGCTGAAT CAAACAAACG TAATAAATAA
|
|---|
| Protein sequence | MTTIADKPDY SLYSNAFGYL RQPLDFNPLK SDADVVVLGL PFDMATTGRS GGRMGPGAIR
QASVNLAWEE TRWPWNFKLS DHLSIVDAGD LVYDCGDSAD FTQRVEDFAT AILASGKAML
SFGGDHFVTL PLLRAHYKTH GKMALLHFDA HTDTYSQGSK YDHGTMFFHA PNEGIIDADH
SIQIGIRTEY NRDDHAFKVI DAATANDLSA DEIVAQIIER IGDLPLYITF DIDCLDPAFA
PGTGTPVCGG ITSDKAMKII RGLAGVNVVG MDVVEVAPAY DNAEITALAG ATLGLEMLHV
WAESNKRNK
|
|---|
| |