| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2055 |
|---|
| Symbol | |
|---|
| ID | 6116318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 2520784 |
|---|
| End bp | 2521443 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641633558 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001760434 |
|---|
| Protein GI | 170726408 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0305732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0543921 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAT CGCTTCACGA AGCTAGGATC ATAGGTTGTC TTCTTGAGAA AGAGGTCACC
ACACCAGATC AATACCCCTT GTCCCTTAAC TCTCTCACAC TTGCCTGCAA TCAAAAATCA
AGTCGTGATC CTGTAATGTC AATGACAGAG TCAGAAACAC AATCAGCCAT CGACTCTTTA
ATGAAAAAGC GGCTTGTCAC TGACCAAACA GGTTTTGGCT CTCGTGTGAC TAAATACAAA
CACAGGTTCT GTAATACGGA GTTTAGCGAC CTTCAATTCT CACCAGCACA ATTTGCGCTT
ATTTGCTTAT TACTTTTACG AGGTCCGCAA ACTCCGGGTG AACTAAAGAG TCGCAGTGGG
CGCCTGCATC AGTTTGCCGA CCTTAATGAA GTAGAAAATG CACTATTAGC CCTTGCACAA
AGAGAGCCTT CTTTGGTACA TCAATTACCA AAAGAGCCTG GCAGACGTGA CTCCCGTTTC
GAAGAGTTAA TTTCAGATCA AGTTAAGGGG GAGTCTGTGC CTATATCTGA GCACAGCAGA
TCACAAAGAG AGGCACCAAG TAAGCGTCAA GATGAGATGG ATGAATTAAC CCTTAGGGTG
TCTCAACTTG AGTTAGAGGT TAAGACGCTC AAAGAGGCAC TACAAGATCT TCTCGATTAA
|
|---|
| Protein sequence | MNLSLHEARI IGCLLEKEVT TPDQYPLSLN SLTLACNQKS SRDPVMSMTE SETQSAIDSL
MKKRLVTDQT GFGSRVTKYK HRFCNTEFSD LQFSPAQFAL ICLLLLRGPQ TPGELKSRSG
RLHQFADLNE VENALLALAQ REPSLVHQLP KEPGRRDSRF EELISDQVKG ESVPISEHSR
SQREAPSKRQ DEMDELTLRV SQLELEVKTL KEALQDLLD
|
|---|
| |