| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2051 |
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| Symbol | rrmA |
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| ID | 6116314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2517357 |
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| End bp | 2518181 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633554 |
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| Product | 23S rRNA methyltransferase A |
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| Protein accession | YP_001760430 |
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| Protein GI | 170726404 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0639711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0300998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGA AAATGAACTA CCTGTGCCCC ATATGTAAAC AACCCCTTTT GTTACAAGAA
AAAACTTGGT CTTGTCTAAG TAACCATAGG TTTGATTGTG CGAAAGAGGG CTATGTGAAC
TTGTTACCGG TACAGAACAA AGGTTCTAAA GATCCTGGTG ACAACAAAGA GATGATGTTT
GCTCGCAGAG AGTTTCTCAA TAAAGGGCAC TATCAAGGCC TAAGCGATAG AATAAATACG
CTTGCTAAAA CCTATGCTAA AGCTGCAAAA AATGGTTTAG ATATAGGTTG TGGAGAGGGC
TATTACAGCC ATCGTTTACA GGAGTGTCTG TCAACGAGTA ATGAGTTCAA GCTTAAAGGG
CTAGATATCT CTAAATCGGC GCTAAAGTAT GCCTCTAAAC GTTACAAGGC GATCGATTTT
TGCGTTGCCA GTGCATTTGA GATGCCTTTT GCTGATAACT GTTTCGATCT TATGTTACGT
GTGTATGCCC CCTCGTTGGA TGAGGAGTTA AGGCGAGTGG TTAAGACTGA TGGCATACTT
ATCACTGCAT CGGCAGGAGA GCAGCATCAC TTTGCGTTAA AGCAGTTGAT ATATGCTGAG
CCTAAACCTC ATATGAGTGA AAGCAGTCAG ATCCAAGGGT TCGAGTTACT GCATAGGGAA
AATTTAGAGT CCTTAATGGT TTTAGAGGAT GAGAGCGATA TCACTCACTT CCTCAATATG
ACGCCATACA GTTGGAAACT GACCGATGAG CAGAAATCTC AATTGGTGCA AGAGGGGCTT
AAATGTGAAT TAGACTTTAA AATAGAGGTC TTTAAGGCAA TTTAA
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| Protein sequence | MEEKMNYLCP ICKQPLLLQE KTWSCLSNHR FDCAKEGYVN LLPVQNKGSK DPGDNKEMMF
ARREFLNKGH YQGLSDRINT LAKTYAKAAK NGLDIGCGEG YYSHRLQECL STSNEFKLKG
LDISKSALKY ASKRYKAIDF CVASAFEMPF ADNCFDLMLR VYAPSLDEEL RRVVKTDGIL
ITASAGEQHH FALKQLIYAE PKPHMSESSQ IQGFELLHRE NLESLMVLED ESDITHFLNM
TPYSWKLTDE QKSQLVQEGL KCELDFKIEV FKAI
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