| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2032 |
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| Symbol | |
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| ID | 6116295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2497141 |
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| End bp | 2500569 |
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| Gene Length | 3429 bp |
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| Protein Length | 1142 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633535 |
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| Product | ribonuclease |
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| Protein accession | YP_001760411 |
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| Protein GI | 170726385 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.390229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.144876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGA TGTTAATTAA TGCAACTCAA TCTGAAGAGT TGCGCGTTGC CCTTGTTGAT
GGGCAACAAC TGTATGATCT AGATATTGAA AGTCCTGGTC ATGAACAGAA AAAAGCGAAT
ATTTACAAAG GTAAAATTAC CCGAGTAGAA CCTTCACTTG AAGCCGCGTT TGTCGATTAC
GGCGCAGAGC GTCACGGCTT TTTACCCCTA AAAGAGATCG CAAGAGAGTA CTTCCCTAAA
GGTTATTCTT TCCAAGGCCG CCCCAATATT AAAGAGGTGG TAAAAGAGGG CCAAGAGGTT
GTTATTCAAA TTGATAAGGA AGAGCGTGGT AATAAAGGTG CTGCACTGAC AACCTTTATC
AGTCTTGCTG GTTCTTATCT CGTTCTTATG CCTAATAACC CTCGTGCAGG CGGGATCTCT
CGTCGTATTG AAGGTGATGA GCGTACAGAG CTAAAAGCAG CACTGTCTGA ACTAGAAGTA
CCTCAAGGTA TGGGCTTAAT TGTTCGTACT GCTGGTGTAG GCAAAGATTC TGCTGAGCTT
AAATGGGATC TTAAGGTGCT AGTCCACCAC TGGGCTGCAA TTAAAGAAGC TGCTGATAGT
CGTCCAGCCC CCTTCTTAAT TCACCAAGAG AGCAATGTTA TTGTTCGTGC TATTCGTGAC
TATTTACGTC GTGATGTCGG TGAAGTTCTA ATCGATCATC CACGTATTTT TGAAGATGCT
AAGCAGCACG TATCACTTGT ACGCCCTGAT TTTGTTGATC GTATCAAGCA GTATGAAGCA
GAAGTTCCTC TGTTCACTCA TTACCAGATT GAGACTCAAA TTGAATCGGC TTTCCAACGT
GAAGTTCGTC TTCCATCTGG CGGTTCAATT GTTATCGATC CAACTGAAGC ACTCACCTCA
ATCGATATCA ACTCTGCCCG TGCAACTAAA GGCGGTGATA TTGAAGAGAC AGCTCTCAAT
ACTAACCTTG AAGCCGCTGA TGAGATAGCC CGTCAACTTC GTCTTCGTGA TTTAGGTGGC
TTGGTGGTTA TCGACTTCAT CGATATGACC CCTGTACGTC ATCAACGTGA AGTCGAAAAC
AGAATGCGTG ACGCCGTTCA CCACGACAGA GCTCGCGTTC AATTAGGCCG TATCTCACGC
TTTGGCTTAA TGGAGATGTC ACGTCAACGT CTACGCCCTT CCCTTGAAGA GTCTGCTGCG
CACCTATGTC CACGCTGTCA TGGCCAAGGC ACTATTCGTG GCACTGAATC TTTAGCACTT
TCAATTCTGC GTCTTATGGA AGAGGAAGCG ATTAAGGAAA ACACATCACA AATTGAAGCA
GTTGTACCTG TTGATGTTGC CGCCTTCCTG CTAAACGAAA AGCGTAAAGC GATCCGCATA
ACTGAGCAGC GCCACGATGT CGAAGTGTAT GTGATCCCAG ATCCAAACAT GACTACGCCA
GATTACCGCG TATCACGTCA TCGTAAAGAT GATCAGATCA GTGAATCTAG CTATAAGTTA
TTAGATAAGC CTGAAGCTAA GCTTTATGAG CCACGTAAAC TTGAACGTGC AGCGCCACCT
CAGCCTGCAT TAAAAGGTTT CTCTGCGCCT AAGAAGTCAA TTGAAGCAAC ACCAAGTGTT
GCAGCTAAGC CAGCTGTTAA GGATAGCAAC GAGCCTGGAC TTATCTCCAA ATTCCTCTCT
GCTATTGGTG CTCTTTTCAA ATCTGAAGAG AAGAAAGAGG AGCCTAAAAA GCCACAGCAG
TCTGGACGCA ACAATCAAAA TAAGAATGCA CGACGCAATA CTCGTCGCAA TGACCGCCGT
CCACGTGATG ATAAAGAGCA GTCAGGCGAA AAGAGAGAGC GTAACCCTCG TAACAGCCGT
AATAAGAATG CTGATTCGAA TAAAGAGAAT CGTGCAAGCA AAGACAGAGA CGAGCAAGCT
AAACGTCAAC CTCGCAATAG CAAGTCTAAT CGTAATCAAA ACAGCGAAAA CGACACGACT
GCAGAACAAC CTAAGCAAGA GGTGGCTAGA GAGCGTCGTC AACGTCGTAA TATGCGCCGT
AAAGTACGCG TTGAAAACGA GCAAACGGAA ACAGTTGTTG ATTCTGTGAC AGCCCCACAA
GAGCAGGCAC AGCCTAAAGC CAATGAGGAG AAGCAGAGCC GTCCAAAGCG TCAGCCTAGA
AAAGCTAAGC CTAAACCTCA AGCGGATGAT TCTGTTGCTT CACAAACAGC AGAGCAGGTA
GAAGCATCTG ATGCAGTTAA ATCAGATACT GTTCAAGCTG AAGTCCAAGT TGTAACTGAT
GCTAAAGCGG TCGAAAGCAA GCCTGTTGAA ACCAGTGTTG AATCAAAACA AGCAGTTGAG
CCAAGTACAG CAAAGAGTGA TGACTCAAGC GATACAGCCA ACTCAACTGA AAACTCTGCA
CCTCAGTCAG CTGAGAATGT AGAGGCTACA GAGGGCAAAG AAGCGTCTGA TTCTCGTGAT
GGTCAACGTC GTAGCCGTCG TAGCCCACGT CATCTTAGAG CCGCTGGTCA ACGCCGCCGC
AGAGATGAAG AGACAACAGA AACTTCATCT GGTGCAGCTC CTGCTTTCAT TCCAAATGAA
ATTGAAGTTG AAAACCAAGC CAATGAGTCT AAAGCTACTG AAGCGGCTAA CGCTGAAGTA
TCTGAGCCAG CTGTCCAAGC TGACACTCAG GTAGTTGCAG AAACTCTTGA TACGGCTAAA
CCTGAAGTGT CAGTGAAAAC TGAAGCCACC GCTGCGCCAG CTAAGTCTGA AGCGCCAGTG
AAAGCTGAAG CCACATCTGC GCCGACTAAG CCTGAAACGC CAGTGAAAGC TGAAGCCACA
TCTGCGCCGA CTAAGCCTGA AACGCCAGTG AAAGCTGCAG CCACATCTGC GCCGACTAAG
CCTGAAGCGC CTGTGAAAGC TGAAGCCACA TCTGCGCCGA CTAAGTCTGA AGCGCCAGTA
AAAGCTGCAG CCACATCTGC GCCGACTAAG CCTGAAGCGC CAGTGAAAGC TGCAGCCACA
TCTGCGCCGA CTAAGCCTGA AGCGCCAGTG AAAGCTGCAG CCACATCTGC GCCGACTAAG
CCTGAAGCGC CAGTGAAAGC TGCAGCCACA TCTGCGCCGA CTAAGCCTGA AGCACCGGTG
AAAGCTGAAG CCTCGACAGC ATCAGCAACG CCAGCTAGAC CTGAGACGCC AGTTAAGGTT
GAAGTTGCAA CAACTGTTGA GACTGTTGCA AGTGTTGAGC CTGTAACCCT AGATACAGCT
AAGGTTAAAC CTACTTCAAG TAGCCGTTTT GGTACTATGG TGACGTCTGA TATGACTAAG
CCTGTAGTTG AAGTGAGAGA AAATATTGCG ACGCCAATGG GTCGTCAATA TGACTCAAAC
GATAACTCGC AGCCAGTCAG GGCAGCAAGA ACTGCAAATA CAGCAAACTC GGAAATGGTA
AAACCATAA
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| Protein sequence | MKRMLINATQ SEELRVALVD GQQLYDLDIE SPGHEQKKAN IYKGKITRVE PSLEAAFVDY
GAERHGFLPL KEIAREYFPK GYSFQGRPNI KEVVKEGQEV VIQIDKEERG NKGAALTTFI
SLAGSYLVLM PNNPRAGGIS RRIEGDERTE LKAALSELEV PQGMGLIVRT AGVGKDSAEL
KWDLKVLVHH WAAIKEAADS RPAPFLIHQE SNVIVRAIRD YLRRDVGEVL IDHPRIFEDA
KQHVSLVRPD FVDRIKQYEA EVPLFTHYQI ETQIESAFQR EVRLPSGGSI VIDPTEALTS
IDINSARATK GGDIEETALN TNLEAADEIA RQLRLRDLGG LVVIDFIDMT PVRHQREVEN
RMRDAVHHDR ARVQLGRISR FGLMEMSRQR LRPSLEESAA HLCPRCHGQG TIRGTESLAL
SILRLMEEEA IKENTSQIEA VVPVDVAAFL LNEKRKAIRI TEQRHDVEVY VIPDPNMTTP
DYRVSRHRKD DQISESSYKL LDKPEAKLYE PRKLERAAPP QPALKGFSAP KKSIEATPSV
AAKPAVKDSN EPGLISKFLS AIGALFKSEE KKEEPKKPQQ SGRNNQNKNA RRNTRRNDRR
PRDDKEQSGE KRERNPRNSR NKNADSNKEN RASKDRDEQA KRQPRNSKSN RNQNSENDTT
AEQPKQEVAR ERRQRRNMRR KVRVENEQTE TVVDSVTAPQ EQAQPKANEE KQSRPKRQPR
KAKPKPQADD SVASQTAEQV EASDAVKSDT VQAEVQVVTD AKAVESKPVE TSVESKQAVE
PSTAKSDDSS DTANSTENSA PQSAENVEAT EGKEASDSRD GQRRSRRSPR HLRAAGQRRR
RDEETTETSS GAAPAFIPNE IEVENQANES KATEAANAEV SEPAVQADTQ VVAETLDTAK
PEVSVKTEAT AAPAKSEAPV KAEATSAPTK PETPVKAEAT SAPTKPETPV KAAATSAPTK
PEAPVKAEAT SAPTKSEAPV KAAATSAPTK PEAPVKAAAT SAPTKPEAPV KAAATSAPTK
PEAPVKAAAT SAPTKPEAPV KAEASTASAT PARPETPVKV EVATTVETVA SVEPVTLDTA
KVKPTSSSRF GTMVTSDMTK PVVEVRENIA TPMGRQYDSN DNSQPVRAAR TANTANSEMV
KP
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