| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2029 |
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| Symbol | rbgA |
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| ID | 6116292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2493306 |
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| End bp | 2494244 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633532 |
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| Product | ribosomal biogenesis GTPase |
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| Protein accession | YP_001760408 |
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| Protein GI | 170726382 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1161] Predicted GTPases |
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| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.831437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.492608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATTC AGTGGTACCC AGGACATATG CATAAGGCAC GTAAAGAGAT TGAAGAGGTG
ATGCCTCAGG TTGATCTCGT GATCGAGGTG TTAGATGCCA GAATCCCTTA TAGTAGCGAA
AACCCTGTCG TTTCAAGCTT ACGTGGCGAT AAGCCCTGTA TCAAACTACT GAATAAGTCA
GATCTCGCCG ATCCTGAAAC CACTCAACGC TGGATAGAGT ACTTAGAGCG CGAACAAGGT
GTTAAGGCGA TGGCCATCAC CACACTGCAA GCGGCCCAAG TGAAAAAAAT TCCCGATCTG
TGTCGCAAAT TTGTACCAAG TCGCGACAAG ATAGAGAAAG ATATTCGTAC CATGATTATG
GGAATACCTA ACGTAGGTAA GTCTACCATC ATCAATACAC TGGCAGGCAG AACGATTGCC
AAAACAGGGA ATGAGCCCGC CGTCACTAAA GTGCAGCAAC GAATCAACCT AAGAAACGGT
ATTGTTCTCT CCGATACCCC AGGGATCTTG TGGCCAAAAG TCGATAATGA GAAAAGCAGC
TATCGCTTAG CCATTACAGG TGCGATTAAA GATACAGCCA TGGAGTATGA GGACGTGGCC
ATGTTTGCGG CAGAGTACTT CCTACAAGCC TATCCAGAGG CGATTGCCGA GCGTTACAAG
CTTAAAGAGC TGCCCGATAC TGATATCGAG CTACTCGAAG CCATTGGCCG TAAAAGAGGC
GCGCTACGAC CTGGCGGACG AATCGATCTG CATAAGGTAT CAGAACTGGT ACTTCACGAG
TTTCGCTCTG GTAAAATAGG CCAACTTAGC TTAGAAACTC CAGAGATGGC TGAAATTGAG
AAAGAGGAAG TGGCTATCTT AATGGCGAAG AAAGAAGCTG AAAAGCAAGC CAAAGAGGAA
GCTGAGAAGC TTAAACGATC TGGTAAGCGA TACAAGTAG
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| Protein sequence | MAIQWYPGHM HKARKEIEEV MPQVDLVIEV LDARIPYSSE NPVVSSLRGD KPCIKLLNKS
DLADPETTQR WIEYLEREQG VKAMAITTLQ AAQVKKIPDL CRKFVPSRDK IEKDIRTMIM
GIPNVGKSTI INTLAGRTIA KTGNEPAVTK VQQRINLRNG IVLSDTPGIL WPKVDNEKSS
YRLAITGAIK DTAMEYEDVA MFAAEYFLQA YPEAIAERYK LKELPDTDIE LLEAIGRKRG
ALRPGGRIDL HKVSELVLHE FRSGKIGQLS LETPEMAEIE KEEVAILMAK KEAEKQAKEE
AEKLKRSGKR YK
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