Gene Swoo_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2014 
Symbol 
ID6116277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2476250 
End bp2476960 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content44% 
IMG OID641633517 
Productmethyltransferase type 11 
Protein accessionYP_001760393 
Protein GI170726367 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.51029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAT TGATGAGCAA TGAATCGAGA GTCCCTGAGA CAGACAATGG ACAGCAGGGG 
GAGTATATCG CTGAGCAGTA TAACTTGATG CAAAGAGATA TTCGTGATCA TGGATGGTTA
AACGACAAGG TGGAGTTACT TATCAATGAA GGTGTTGTGA GTGGTGAGAT ATTAGAGGTC
GGGATGGGAC CTGGCTACTT AGGGCTTGAA TGGCTAAAGA TGGTGGGTAG AAAAGGGCAC
GTAACGGGCT TAGATATTGC TGCTGATATG GTCAACGTAG CACGACGAAA TAGCGTTGAA
TATGGCCTTG AAGCAAGCAC CACATATCAG GTGGGTGATG CATTGAAAAT GCCGTTTGAG
GACGAGAGTT TTAACCATGT TATTAGCTAT GGATCACTGC ATGAATGGAA TATGCCCATG
GAAGTGTTTA AAGAGATAGA TAGAGTCATT CGACCTGGAG GACGTTACTG CGTCATTGAT
CTAAGGCGCG ATCTTGACAG GCAGGAGATC TCTTTTATGC GCATGAATAT TGCGACTGAT
ATGCGAAAGG GGTTTATGAG TTCCGTTAAG GCTTCATATA CCCGTGATGA GCTCATTAAG
ATGCTTTCTG GTTCGGTACT CGAAGGCGCG AAAATTCAAA ACGTGCCTTT GGCTTTATGT
GTGTCAGGCC AAAAGAGTCA CAGTAAAAAT TCAAGTAAGA ACAAGCTGTA A
 
Protein sequence
MTQLMSNESR VPETDNGQQG EYIAEQYNLM QRDIRDHGWL NDKVELLINE GVVSGEILEV 
GMGPGYLGLE WLKMVGRKGH VTGLDIAADM VNVARRNSVE YGLEASTTYQ VGDALKMPFE
DESFNHVISY GSLHEWNMPM EVFKEIDRVI RPGGRYCVID LRRDLDRQEI SFMRMNIATD
MRKGFMSSVK ASYTRDELIK MLSGSVLEGA KIQNVPLALC VSGQKSHSKN SSKNKL